Gene Swoo_4091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4091 
Symbol 
ID6118441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4968117 
End bp4969322 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content42% 
IMG OID641635652 
Producthypothetical protein 
Protein accessionYP_001762442 
Protein GI170728416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT CAAATAAGAA AGATGCGTTA AATTGCATAA GTAGACGAAA CTTTTTAAGT 
GGTAGCATTT CAATTGCGCT CTTAACAGGA ATCTCATTAA CCTCGATAAA AAGCATGGCA
AAAGCCGTTA ACCTCGATTC AAGTTTATTG CTTACCATCA TCAAACATGA GCTGTCTGGA
TTCAATGGTG AACTGCTAGA CCCTATTACT GGCAACTATC AGCTTGGCCA AGGTTATCGT
TTCTATAACC CTATTTTAAT GCGCTTTCAA TCACCAGACT CTATGAGCCC CTTTGGTGAA
GCAGGCCTTA ATGTCTATGC CTATTGCCAC GGTGATCCGG TCAATTTCAA TGATCCAACG
GGTCATTTAG ACGGATGGAA AATTGGTTTT GGAATTTTTG CTGTCGTCAC AGGCATTATT
GGTGCGGTTT TAGCCCCCTT TACCGGTGGA ACATCATTTG CTGTAGCTAT GGGTGTCGTT
AGCGGCGTAT TAGGAGCTAT TGGAGGCAGC TTAACCATAG CTTCGGCTGC TGTTGAAGAT
TCAAACCCTA CAGCCGCTGC AAATTTAGAT ATTGCCTCTA TTGTATTTTC TGTCGCATCC
ATTGCTGCTG GGGTTTCCGG CGCACTAAAA GGCACAGTAA GTGGATTTAA ATCCCGCTTT
AGTACAAGTA ACTTTAAAAC CACATCGAAA TTAAAAATTG GTAAAAGCGC CAAAGCTCGT
AATGATAAAT TTTTTACCAA AATTAAAGAC AATGCTTTTA AAGAAGTCGA TGCACGTAGC
GGTGCGTTAA GCGTTGAGTC TGCAGATACC GTTATGGCAA CTAAGCTAGA GTCTCATGTT
GTGGGTCAAC GCGATCTCTC CTCAAAGTTT ATCTCTATGA AACCAAAGGT ACAGTACAAA
CCCACACGTT TTTTGAATAA CACCATGGCT TGGAAAGTTG AAAATGTAGC CAAGACAGGG
ATGAACTCAG GACATTTTGC TAGGAGCTTT GCTGGGGCAC TTGTTAGACA GGGCTTATCT
ATGTCTTCAG GCAGTTTTTT AGCGGCATCA AAGTTAGTCA CAGCAAGAGA TAAACTAGAC
AATATCAACG AAAACAACAA TACCGATACA CCACAAGCGC CCGGAACGTT TGGACAGATC
CAAGCCACCT TCTCTCTCGA CACTGACATC GTCAACCGCC AAATACGTAA CGGTATTTTC
GCCTAA
 
Protein sequence
MKNSNKKDAL NCISRRNFLS GSISIALLTG ISLTSIKSMA KAVNLDSSLL LTIIKHELSG 
FNGELLDPIT GNYQLGQGYR FYNPILMRFQ SPDSMSPFGE AGLNVYAYCH GDPVNFNDPT
GHLDGWKIGF GIFAVVTGII GAVLAPFTGG TSFAVAMGVV SGVLGAIGGS LTIASAAVED
SNPTAAANLD IASIVFSVAS IAAGVSGALK GTVSGFKSRF STSNFKTTSK LKIGKSAKAR
NDKFFTKIKD NAFKEVDARS GALSVESADT VMATKLESHV VGQRDLSSKF ISMKPKVQYK
PTRFLNNTMA WKVENVAKTG MNSGHFARSF AGALVRQGLS MSSGSFLAAS KLVTARDKLD
NINENNNTDT PQAPGTFGQI QATFSLDTDI VNRQIRNGIF A