| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4058 |
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| Symbol | |
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| ID | 6118408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4930202 |
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| End bp | 4931038 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635619 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001762409 |
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| Protein GI | 170728383 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCTAA GATCGATACA CTACTTTCAA TCTGTCTATG AACAGGGCAG TATCACGGCA
GCTTCACGCC AATGTTTCGT CTCTCAGCCC TCAATCACTG CGGCAATTTC ACAGCTAGAA
CAGCAACTTA ATGTAGAGCT ATTTGTGCGC CATACTGGTG GCGTACGCCC AACTTCAGCC
GCCGATAAAC TCTATCCATT GGCGAGAGAG ATGAGTGAAA ATGAGCAAGC TATTCTTCAT
CTTTTTAAAG ATAGCCCGGC CCCAGTGCCG CTCCGTTTGG GCCTAATGCG CTCTCTTGGT
GCCCAACGTA TGAGTGATTT ACTGACAGAG CTGACCCAAA GGATCGACAA CCTTGAACTC
ACTCTTGTGG AGCCTGATGA GCCCAGTGAT GCTAGAGTCG TTTTATCTCA ATCAGCATCC
AGTAGCGAAG ACTTTATCCC TATTTGGGAA GATAAGTACC AACTCGCAAT CCCCTGTAAC
TGGTCTTTAG CTTCTAAGCC TATTATCAAG ATAGAAGATC TCGATGGACT GCCCTTCATT
AATCGAACCC CATGTGATGT GCAGGACAGG CTTAAACATG CCATGACCAA GTGCGGTGCC
CAATTTCAGT CCAGAGCCAA TATTCGCACC ATAGAATATA CTTGGCCTAT GGTCTGCGCT
GGCGTAGGCG CAGCTCTCCT TCCCGATTGG CAAGAGATAA AACACAACAA GGCCTTAGTA
TTAAGGCCAA TTGAGGGGGA GAAATTGATT AAACAGATAG GATTAGCTTA CAGTGCAAGT
CGGTTGAGTG AGCCAGCTAT TACCGCGGTG ATATCCGTTT GCCGAGACAA GGCATAA
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| Protein sequence | MKLRSIHYFQ SVYEQGSITA ASRQCFVSQP SITAAISQLE QQLNVELFVR HTGGVRPTSA
ADKLYPLARE MSENEQAILH LFKDSPAPVP LRLGLMRSLG AQRMSDLLTE LTQRIDNLEL
TLVEPDEPSD ARVVLSQSAS SSEDFIPIWE DKYQLAIPCN WSLASKPIIK IEDLDGLPFI
NRTPCDVQDR LKHAMTKCGA QFQSRANIRT IEYTWPMVCA GVGAALLPDW QEIKHNKALV
LRPIEGEKLI KQIGLAYSAS RLSEPAITAV ISVCRDKA
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