Gene Swoo_4043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4043 
Symbol 
ID6118393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4919989 
End bp4920672 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content46% 
IMG OID641635604 
Producthypothetical protein 
Protein accessionYP_001762394 
Protein GI170728368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC ATGTATTAAC AACCTCTGGC CAAACTTGTC TTCAGTCATT ACTTAAAGTC 
TGGTTTGATT TTGATCTGGC GCTATCTAAG GCCCCTATTG TTAAACGTTT AGAGCAGGGC
CGCTTGAGCC ATGAAGATTA CCAAAAACTG CTGTTAAACC TACGTCAGCA GGTGATAGAG
GGCTCACGCT GGATCACCCG TTGTGCATCG AGCTTTAACC GAGAGTATGC CGATGTTCGC
TCAATTGTGA TTGGCCATGC CAAAGATGAA CATAAAGATT TTCTTATGTT GGAGAGCGAT
TATGTTGCTG TTGGTGGCGA CATCGATGTG ATCCAAAATA GCAGTAAGAA TATTGGCTCA
GAGGCGCTGC ACGGCTTTTT GATGTATCGA GCGAGCCAAG AGAACCCTGT GGATCTCATT
GGTGCCATGT GGATCATTGA GGGGCTTGGC AACAAGATGG CAAGCAAATG GGCCCAGCTG
GTTGAGGAGC AGCTTGAGCT ACCCAAAGAG GCGACCCAAT TTATGCGTTA TCACGGTGAA
AATGATGAAC ATCATCTTGA GGAACTCTAC AAGCTGGTGG ATCGTGTTGC TGTTGATGAT
GGAGCAATAA AAGCGATTGA GCGAACCGCG AAAGTGGTTG CTAGGCTCTA TATTCTTCAA
TTGGAGGAGG TTGACCATGT CTAA
 
Protein sequence
MTAHVLTTSG QTCLQSLLKV WFDFDLALSK APIVKRLEQG RLSHEDYQKL LLNLRQQVIE 
GSRWITRCAS SFNREYADVR SIVIGHAKDE HKDFLMLESD YVAVGGDIDV IQNSSKNIGS
EALHGFLMYR ASQENPVDLI GAMWIIEGLG NKMASKWAQL VEEQLELPKE ATQFMRYHGE
NDEHHLEELY KLVDRVAVDD GAIKAIERTA KVVARLYILQ LEEVDHV