Gene Swoo_4003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4003 
Symbol 
ID6118353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4872884 
End bp4873390 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content48% 
IMG OID641635564 
Producthypothetical protein 
Protein accessionYP_001762354 
Protein GI170728328 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3721] Putative heme iron utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.426108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCA GTAATGATGT GATACGTGAG TATTTCGACA GTCACCCCAA TGCGATGCCA 
AGTCAGGCCG CTGCCGAACT TGGAACTTCT GAATTGGTGG TTGTATCTGC CCTGCCCGAA
GAGCAGGTCT GTCTATTTCC ATTAGTAGAT AAAGATGAAC TGCTTTCCTG TTTGCCTCAC
TGGGGGCCAA TGACCACCAT AGTCTCAGTC TCAGGCAGTA TTTTTGAATT TAAGGGAGAT
TTTCCACAGG GGAAGTATGC CTATGGCTAT TACAACTTGA TCACTCAAGG TAATGGTCTG
CACGGTCATC TGAGTCTTGA TGGTCTTACA GCTATTGCAC TGGTGAGCCG TCCATTTAGA
GGAAAGGAGA GTCACTCAAT CAACTTCTTT GGCAGTGAGG GGGAGATGAT CTTTAAGGTG
TATCTGGGAC GGGACAGTAA CCGAGTTCTC CTTCCTGAGC AGGTGACTCG TTTTAATGCA
TTGAAGGAGC GAGCCATTGC GGCCTAG
 
Protein sequence
MQPSNDVIRE YFDSHPNAMP SQAAAELGTS ELVVVSALPE EQVCLFPLVD KDELLSCLPH 
WGPMTTIVSV SGSIFEFKGD FPQGKYAYGY YNLITQGNGL HGHLSLDGLT AIALVSRPFR
GKESHSINFF GSEGEMIFKV YLGRDSNRVL LPEQVTRFNA LKERAIAA