| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3954 |
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| Symbol | |
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| ID | 6118303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4818767 |
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| End bp | 4820260 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635515 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001762306 |
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| Protein GI | 170728280 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTT CTTTGGCGCT GATGTTACAG CTAACTATCC TATTGCCGCT GCTGGCAACC
TTTGCAATAG CAGTAACGGG ACAGAAACCT AATCTTCGTG AAGCGGTCAC CATAAGTACC
AGTCTGGCGG TGCTTTACTG CGTGGTCAAT CTCTACCAAG CACTCAATGC CGGAGCCAGC
ATTAGCGTCT CATGGTGGGC ACTTATGCCC GGTTTAGAGA TAAGCTTTGT TGTTGAACCA
CTGGGTATGT TGTTCGCACT TATTGCCAGC TTTCTGTGGC TTATCACCAC CATTTACGCC
ATCGGCTATA TGCGTGGGCA TGGAGAAGAG AACCAAACCC GTTTTTACAT CTGTTTTGCG
TTGGCGATTA GTGCAGTAAT GGGGCTCGCC TTTTCGGCGA ACTTATTTAC CCTGTTCATC
TTTTACGAAG TGATAACGCT ATCAACCTAC CCGCTGGTTA CCCACGCGGG TACCGAAAAA
GCTAAGCAAG GTGGCAGGGT CTATCTGGGT ATCTTACTCA GCACTTCTAT CGCTTTTTTC
CTACTGGCCA TCATCTTGAC CTGGTTTGTC AGCGGTAGCC TTGAATTTAA AGCGGGCGGT
GTGTTTGATG ACAATGTCAA TACCACAGTC GCAGGCGCTA TCTTAGTACT GTTTGTATTT
GGTATAGGAA AAGCGGCAAT AATGCCATTT CATCGTTGGT TACCAGCTGC GATGGTGGCA
CCAACACCGG TCAGTGCCCT GCTCCATGCC GTGGCGGTAG TAAAGGCAGG GGTATTTACG
GTACTTAAGG TCTGTATCTT CATTTTTGGA CTCGACCTAC TGCCTAAGTT ACCCACCACT
GAGTTTTTAC TATATTTAGC AGCCATTTCG GTGCTATTAG CCTCTATTGT GGCCATGCGA
CAAGACAACT TAAAAGCCAG ATTAGCCTAC TCGACGGTGA GCCAACTTGG CTATATCACC
ATCGGTGCGC TGCTAGCGAC CTCATCGGGC GTTATCGGCA GCTCTATGCA TATCGCCTCC
CACGCATTTG GCAAAATTAC TCTGTTCTTT TGTGCTGGCG CGATTTTGGT GGCCAGTCAT
AAATCAAAGA TCAGTGAGAT GCGCGGCTTA GGCTTTGCGA TGCCGATCAC TATGGCTGCA
TTTTTCATTG CTAGCCTAAG CATTATTGGC GTTCCACCAG CTGGCGGCAC ATGGAGTAAA
TGGTTCCTGT TAATGGGCAC TGTAGAAACC GGTTATTGGT TCATCATGGT CACACTGATG
CTCAGTTCTT TACTTAATAT CGCCTACCTA CTGCCCATTC CTTACCACGC CTTTTTCCCA
GGTAAGGATC ACCCAGCAGC ATCAAGCGGC GGTATTAAAG AGGCACCGTT ACCGTCATTG
ATTGCATTAA CCATCACCAC CTTAGGCTGC TTAACTATGT TCATCTATCC ACAGCCCTTT
TATGAATTAG CAAAAGCTAT CTTGACTGTA TCTGGAGTCA GCCATGGACA ATGA
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| Protein sequence | MNLSLALMLQ LTILLPLLAT FAIAVTGQKP NLREAVTIST SLAVLYCVVN LYQALNAGAS
ISVSWWALMP GLEISFVVEP LGMLFALIAS FLWLITTIYA IGYMRGHGEE NQTRFYICFA
LAISAVMGLA FSANLFTLFI FYEVITLSTY PLVTHAGTEK AKQGGRVYLG ILLSTSIAFF
LLAIILTWFV SGSLEFKAGG VFDDNVNTTV AGAILVLFVF GIGKAAIMPF HRWLPAAMVA
PTPVSALLHA VAVVKAGVFT VLKVCIFIFG LDLLPKLPTT EFLLYLAAIS VLLASIVAMR
QDNLKARLAY STVSQLGYIT IGALLATSSG VIGSSMHIAS HAFGKITLFF CAGAILVASH
KSKISEMRGL GFAMPITMAA FFIASLSIIG VPPAGGTWSK WFLLMGTVET GYWFIMVTLM
LSSLLNIAYL LPIPYHAFFP GKDHPAASSG GIKEAPLPSL IALTITTLGC LTMFIYPQPF
YELAKAILTV SGVSHGQ
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