Gene Swoo_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3936 
Symbol 
ID6118285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4795945 
End bp4797480 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content45% 
IMG OID641635497 
Producttryptophan halogenase 
Protein accessionYP_001762288 
Protein GI170728262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAC CAATCACACA GGTGATCATT GTCGGTGGTG GCACAGCCGG ATGGATGTCG 
GCAGCAAGCT TAGGCAGATA CGCACAGGGG AAGAATCTAA CGATAACTGT GATTGAGTCA
TCTCAACTTC CCACTGTTGG TGTAGGTGAA GCAACAATAC CTAATATCGT AGAGTTCAAT
CACAGTATTG GTTTGAATGA GATAGAGTTT ATCAAGGCGA CGCAAGCCTC CTTCAAACTG
GGCATAAAGT TTGAAAACTG GAGCCAGACT TCCCCCAGCT TTTTTCACCC TTTCTCTGAT
TATGGTTTAC CAATCAACAA GGTTGATTTC CATCAATACG TCAACCGCTT AGCTATAGAA
AACTATAAAC TAGAAGGGCA TAAGCTAGAA GGTCATAATT TTAAGCTAGA AGATTATAGC
TTCTCAAGCG TACTTGCTCA GCAGGGTAAC TTTGCTCAAC CTCACCCCAA CCCCCCCTCT
CCTCTTGCAG ACTACTCCTA TGCTTACCAT TTTGACGCTG GGCTCTACGC CGAGCTGTTA
AAATCACACT CCTTAAAGAT GGGTGTCGAG CATGTAGATG CAACCATTGA TCAAGTGAAC
CTGCATAAAA ATGGGTTTAT CGAGTCAGTG TCACTGCATG ATGGTCGGGT GCTCGAAGCC
GATCTCTTTA TTGATTGCTC AGGTTTTAAA GCACTACTTA TCGAGCAGGC GATGAAGACA
GGTTTTGATG ATTGGAGCGA ATGGTTACTG TGTGATACCG CCTTAGCCGT GCAAACTAAA
TCAACAAGCT CCCCCAACCC CTACACTCGC TCGATAGCCC ACAATAGTGG TTGGCAGTGG
CATATTCCGC TGCAGCATCG TACGGGAAAT GGCTACATTT TTAGCAGCCA ATTTGAAAAT
AAAGCCTCAG CGGAGCAGAA CTTACTCACC AGTCTCACTG GCGAACCCAT CTCTCAAATT
AGGCAGTTTT CATTCACTCC GGGGAGAAGA AAGCAGATCT GGAATAAAAA CTGCTTTGCG
GTAGGGCTTT CCAGCGGTTT TCTTGAGCCA ATTGAATCGA CCAGTATTTC GCTGATACAG
AGTGCAATAG CTAAGCTATT GAGCTTTTTC CCTGATACTA GCTTCAATGA ACATGATATC
AATGAAGTAA ACAGATTACA TAACAGTGAA TTGGAACATG TAAGAGACTT TATTATCCTG
CACTACAAGC TAGCAAGTGG AATAGACTCC CCATTTTGGC AATACTGCCA AGAGATGAGA
GTGCCTGAGA CCCTGTCTCA TAAGATTGAC GTCTACCGTA GCCAAGGACA TATCATCCTA
CGTGAAAATG AGTCCTTCGA AGCGGCCAGC TGGCTGACCA TGTATCACGC ATTTGGTGTA
TTACCTAACC GCTACGACCC AAGAGTAGAT GCCATCCCTT TAGAGACTGT TAAGCAAAAC
CTAGCACAGA TGAAGCACTC AATAATCAAT GCTGCGAGCC AGTCTGTTAG CCATCAAACC
TTTATTGATA GACACTGCAA AGCAGTGTCT CAATAG
 
Protein sequence
MTKPITQVII VGGGTAGWMS AASLGRYAQG KNLTITVIES SQLPTVGVGE ATIPNIVEFN 
HSIGLNEIEF IKATQASFKL GIKFENWSQT SPSFFHPFSD YGLPINKVDF HQYVNRLAIE
NYKLEGHKLE GHNFKLEDYS FSSVLAQQGN FAQPHPNPPS PLADYSYAYH FDAGLYAELL
KSHSLKMGVE HVDATIDQVN LHKNGFIESV SLHDGRVLEA DLFIDCSGFK ALLIEQAMKT
GFDDWSEWLL CDTALAVQTK STSSPNPYTR SIAHNSGWQW HIPLQHRTGN GYIFSSQFEN
KASAEQNLLT SLTGEPISQI RQFSFTPGRR KQIWNKNCFA VGLSSGFLEP IESTSISLIQ
SAIAKLLSFF PDTSFNEHDI NEVNRLHNSE LEHVRDFIIL HYKLASGIDS PFWQYCQEMR
VPETLSHKID VYRSQGHIIL RENESFEAAS WLTMYHAFGV LPNRYDPRVD AIPLETVKQN
LAQMKHSIIN AASQSVSHQT FIDRHCKAVS Q