Gene Swoo_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3930 
Symbol 
ID6118279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4792104 
End bp4792763 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content40% 
IMG OID641635492 
Producthypothetical protein 
Protein accessionYP_001762283 
Protein GI170728257 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAC ATTTAACAAC AATCGACATT GCTCAAATGC AGCAACGAAA TCGAGCAAGA 
TTAATCAATA GTCTATCAGG CTTCAAAAGC GCAAATCTGG TTGGCAGCCA AGATGCTCAT
GGCTGCAGTA ACTTATCTAT GGTCAGTTCA GTATTTCATC TTGGTGCTAA CCCTGCACTA
ATGGGGATGA TTATTCGACC TGATGGCGTT CCACGAGATA CGCTAAGTAA TATCAAGCAA
ACTAAAAGCT ACACCATTAA CCATGTCACA TCTGAAATTT ACCGCAAAGC TCATCAAACA
TCAGCTCGTT ATGATGCCAA TGTGTCTGAG TTTACTGAGG TTGGGTTAAC AGAGGAATAT
GTTGAAGGGA TCATTGCCCC TTTTGTAATG GAAAGTAAGC TTAAATTCTC ACTTGAAGTC
CGTGAAATGA CTCAATTGAT GATTAACAAC ACCACCCTAG TGATAGGTGA AATAAAGCAC
GTTATTGTTG ATGCCTTGGG AATTAAATCA GATGGGTATA TCGATATTGA AGCACTTGAT
ACCATTACCG TATCTGGTCT CGATAGTTAT CACCAGACAA AGCGTTTAAC GCGTTTAAGT
TACGCTAAAC CAAACAAACA CCTTGAAAAA CTACCACTAA GTGGCGGCGA AGACGCCTAG
 
Protein sequence
MMKHLTTIDI AQMQQRNRAR LINSLSGFKS ANLVGSQDAH GCSNLSMVSS VFHLGANPAL 
MGMIIRPDGV PRDTLSNIKQ TKSYTINHVT SEIYRKAHQT SARYDANVSE FTEVGLTEEY
VEGIIAPFVM ESKLKFSLEV REMTQLMINN TTLVIGEIKH VIVDALGIKS DGYIDIEALD
TITVSGLDSY HQTKRLTRLS YAKPNKHLEK LPLSGGEDA