Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3930 |
Symbol | |
ID | 6118279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4792104 |
End bp | 4792763 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641635492 |
Product | hypothetical protein |
Protein accession | YP_001762283 |
Protein GI | 170728257 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAC ATTTAACAAC AATCGACATT GCTCAAATGC AGCAACGAAA TCGAGCAAGA TTAATCAATA GTCTATCAGG CTTCAAAAGC GCAAATCTGG TTGGCAGCCA AGATGCTCAT GGCTGCAGTA ACTTATCTAT GGTCAGTTCA GTATTTCATC TTGGTGCTAA CCCTGCACTA ATGGGGATGA TTATTCGACC TGATGGCGTT CCACGAGATA CGCTAAGTAA TATCAAGCAA ACTAAAAGCT ACACCATTAA CCATGTCACA TCTGAAATTT ACCGCAAAGC TCATCAAACA TCAGCTCGTT ATGATGCCAA TGTGTCTGAG TTTACTGAGG TTGGGTTAAC AGAGGAATAT GTTGAAGGGA TCATTGCCCC TTTTGTAATG GAAAGTAAGC TTAAATTCTC ACTTGAAGTC CGTGAAATGA CTCAATTGAT GATTAACAAC ACCACCCTAG TGATAGGTGA AATAAAGCAC GTTATTGTTG ATGCCTTGGG AATTAAATCA GATGGGTATA TCGATATTGA AGCACTTGAT ACCATTACCG TATCTGGTCT CGATAGTTAT CACCAGACAA AGCGTTTAAC GCGTTTAAGT TACGCTAAAC CAAACAAACA CCTTGAAAAA CTACCACTAA GTGGCGGCGA AGACGCCTAG
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Protein sequence | MMKHLTTIDI AQMQQRNRAR LINSLSGFKS ANLVGSQDAH GCSNLSMVSS VFHLGANPAL MGMIIRPDGV PRDTLSNIKQ TKSYTINHVT SEIYRKAHQT SARYDANVSE FTEVGLTEEY VEGIIAPFVM ESKLKFSLEV REMTQLMINN TTLVIGEIKH VIVDALGIKS DGYIDIEALD TITVSGLDSY HQTKRLTRLS YAKPNKHLEK LPLSGGEDA
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