| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3918 |
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| Symbol | |
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| ID | 6118267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4776248 |
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| End bp | 4778293 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635480 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001762271 |
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| Protein GI | 170728245 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGT TTCACTCGGG GAGAGGAGTA AAGCCTCTCA CATTAGCTAT CTCGCTGGCA
CTGGCGGCGA GTAATGTGTA CGCAGAAGAG TCAGCAGTTA ACGAGAGCAA GGTGATTGAG
TCGATTGCTG TTGTCGGCCA GACGACCAAC ACTGAGATCA CCCCCGATGA GCTTGAGAAG
TATCAAGCCA ATGATCTTGC GGATATTTTT AGATTTGTAC CTTCAGTCTC TGTGGGAGGC
TCTTTAGGGG TCGCACAGAA GGTCTATATT CGTGGTCTAG AAGACACCTT ATTCAATGTT
ACCGTCGACG GCGCGCCGCA AACTGGCACA CTATTTCACC ATATTGGTCG CGTGGCTATC
GATCCTGAGC TGTTAAAAGA GGTCGAAGTG CAGGCGGGTG CTGGGGAGGC AACCAGTGGC
GCAGGTGCTA TTGGTGGAGC GATCCGCTTT AAAACCAAAG GAGTCGATGA CCTGCTTAGT
TCTGATGAGC AGTTTGGTGG AACGATTAAA GCGGGTTACT TCAGTAATGA CGGTTATAAA
ACCAGTGGTA CCTTTTATGG AAGGCTTTCG GATAGCTGGG GAGTATTAGG ATCTTACATT
TATATTGACC GTGACAATAT GGAAGATGGT GATGGCAACG AACTCTACGG CACCTCGGCT
GAGCAGAGTT TAGGCTACGT TAAGGTTAAT GGTGAATTGA CCGATAAGCA GACTTTGAGT
CTCAGTTATG AGAAGCGTAA TGAGGAGGGG GAGTTTGGAG CAAGACCTAA CTGGCCAACC
TTAGAGGGAG ACACGTTATT TCCTATGGAG GGTGAGCGTG AGACCTTTGT GTTAAATCAT
CTTTTTTCTG CTAATGACTT AATTAATCTT GAAACAAGCT TGTTCCATAC TCAATCCTCG
GTGGAGCAGA ATCGCTTCGA TCGTTGGGGG CTCTATGGTG CAGAGATGAA AACCTATGGC
TTTGATATTT GTAATATCAG CCTATTGGGT GATCACACCC TGACCTATGG TATTGAGTAT
CGTAAAGACA AGGTCAGCAG TGAGTATCTT GCCGATGCCA GCGTATGGCA GAAGTGGGCT
TGGGATCCTA ATATCGGTAA GTTCCAAGAG GAGGGGGAAG TTAAAGGTAT GTATCTGCAG
GATCACTGGC AGATCAATAA TGAACTCTTA CTCAGCTTTG GTGTGCGCTA CGATCAATAT
GATGTTGAGC AGGTAACTTA TGATAATCAG ACCGACAGCG ATGGTGTTAG CCCGAATATA
GGCCTGAATT ATGACTTCCA TCCGAACTGG AGGTTGACCT TAGGGTATGC TCAAGCGATG
CGGGGCAAAG AGGTCGGTGA TGCCTTTACC TTAGCGCAAG CGCCAGATTG GATATCAATC
GATCCTGATC TCGATGCTGA AAAGGTGGAT AACACCGAAA TTGGTTTGAA CTACCATGAC
GAGCATTGGC AGGTGACCGC TTCAGTGTAT CAATCTGATA TCGATGATGT TATCTATGAT
CAACTAGGCC GTGACGTCTA TTTTGAGAAT ATTGGTCAGT TAGAAACCAA AGGTTTCGAG
CTAAAAGCTG TTTACTGGTA TGAGGATTGG CGTGTACAAG CCAGCTACAG TAATAATGAT
GCTGAGCTAA ACGGAAATAC TGTCGAGGGC TATGAGCATA TTGGTTTGGC TAATGCTCGT
GGTGATACCT TAGGTTTAAA TGTTAACTAT GCGCTTTCTG ATAATCTTGA GATGGGATGG
AACTTTAGTT ACGTCAGTGA TCTCAATGAT ATCGAGGTTC TTCAACGTGG CGTAGAGATA
GGTTGGATAG AGCAGACTCA AACTATCGAT AAGCCAGGTT ATCAGGTCCA TGATATCTAT
GTTCAATGGG TTCCGCTAAG TAGTGAAAGC TTGACGGTAA ACCTCGCGGT ACAAAACCTG
TTTAATGAGC AGTATCGTGA TCATTCAAGT GTTGGTGATT ATAACAAAAT CAAGGGTTGG
GAAGGGGTTG CAGGCCTCTA TGAGGCTGGT CGAGATATCC GTGTCTCAAT GACTTACCAG
TTCTAA
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| Protein sequence | MTSFHSGRGV KPLTLAISLA LAASNVYAEE SAVNESKVIE SIAVVGQTTN TEITPDELEK
YQANDLADIF RFVPSVSVGG SLGVAQKVYI RGLEDTLFNV TVDGAPQTGT LFHHIGRVAI
DPELLKEVEV QAGAGEATSG AGAIGGAIRF KTKGVDDLLS SDEQFGGTIK AGYFSNDGYK
TSGTFYGRLS DSWGVLGSYI YIDRDNMEDG DGNELYGTSA EQSLGYVKVN GELTDKQTLS
LSYEKRNEEG EFGARPNWPT LEGDTLFPME GERETFVLNH LFSANDLINL ETSLFHTQSS
VEQNRFDRWG LYGAEMKTYG FDICNISLLG DHTLTYGIEY RKDKVSSEYL ADASVWQKWA
WDPNIGKFQE EGEVKGMYLQ DHWQINNELL LSFGVRYDQY DVEQVTYDNQ TDSDGVSPNI
GLNYDFHPNW RLTLGYAQAM RGKEVGDAFT LAQAPDWISI DPDLDAEKVD NTEIGLNYHD
EHWQVTASVY QSDIDDVIYD QLGRDVYFEN IGQLETKGFE LKAVYWYEDW RVQASYSNND
AELNGNTVEG YEHIGLANAR GDTLGLNVNY ALSDNLEMGW NFSYVSDLND IEVLQRGVEI
GWIEQTQTID KPGYQVHDIY VQWVPLSSES LTVNLAVQNL FNEQYRDHSS VGDYNKIKGW
EGVAGLYEAG RDIRVSMTYQ F
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