Gene Swoo_3906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3906 
Symbol 
ID6118255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4760552 
End bp4760974 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content46% 
IMG OID641635468 
Productglobin 
Protein accessionYP_001762259 
Protein GI170728233 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.22456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAA GAAGTTGCGA ATATGGCGTT GGAGATAACT CCTACAAGAT GGCTGGTGAA 
TTAGCAGGGC TAACTCAGTT AGTGGATGAG TTTTACAACA ATATGGATGA GGTAACTGGT
GCTAAAAAGA TCCGCGATAT GCACCCGGAA GATCTCACCG AATCACGCCA AAAACTAGTG
TATTTCCTCT CTGGCTGGCT CGGCGGCCCT AGACTCTACC GTGAACATTA TGGCCCCATT
AGCATCCCTA AATCCCATCA GCATTTACAT ATCGGCCTTG AGGAGAGTGA AGCTTGGTTG
TCTTGTATGG AGAAAGCGGT CGCTAAACAG CCCTATGAAG CTCCATTTAA GCTCTATCTT
ATGGAGCAGT TACAAGTTCC AGCCCAGAGG ATAAGACAAG TATCATCGGC CCGTAAAATC
TAA
 
Protein sequence
MTPRSCEYGV GDNSYKMAGE LAGLTQLVDE FYNNMDEVTG AKKIRDMHPE DLTESRQKLV 
YFLSGWLGGP RLYREHYGPI SIPKSHQHLH IGLEESEAWL SCMEKAVAKQ PYEAPFKLYL
MEQLQVPAQR IRQVSSARKI