| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3866 |
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| Symbol | |
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| ID | 6118215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4711279 |
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| End bp | 4714320 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635428 |
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| Product | hypothetical protein |
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| Protein accession | YP_001762219 |
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| Protein GI | 170728193 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0438741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTAA AGGATGAGCT ACTAGAGCTA AGGGCGGAGT TAGATAAGCT ACGATGCGAG
CAAACAGAGC AGCAACAAGG CCTAACCAGC CAGTTAGATC GATTGAGCAG TAAACTCGAT
AGCCTTCAAC TTAAGGTCAA TACTCAAGCC CTCGATACCA GTGATAACGA CTTAGCTGTT
AGCATGGAGG AACAATCGAG TCAGACAACA AGGGCTATTG AAACAGTAAC GCCAACAAAA
CAAGCTGACG CTTATCAGCA GGTGACGATT GACCCTTGGA GTGAGACAGA GTTAACACCG
CCCTCTCAAC ATCAGACCCG CAAAGCTAAA TCAGGTGCAA GCACTGAACT AGCCGCTCAG
CTAAGTCAGT CGGCAGCCCA ACTTAGTGAC AGTTTAATCA GCCTACTTGG CCCATTATCC
GGAATTTTTA ACCAGATAAA ATCTTTCTAT CAACACTATC AGGGTAGAGG GCAAGGGCCA
GTATTCCTGA TGACAGTCGC TGGGATCATC ACCCTAACCT TAGGTTTTGG CTACCTATTA
CAATACTCAA TCAACAACTG GTTTTCTGAA CTTGGTAAAG CACTATTTGG CTTTGCTTCG
GCAAATGCTT TTATCGCTAT CGGTGCATTT ATCCATAAAA AACGCCCCGG TATGCAGGAC
TTCGCCTCGA GTCTGGTTGG CTTAGGACTC ATTCTCAACT TCTTAAGCGC CTACTTTATC
GGGCCTTATT TTGGCCTTAT TCCCACAAGT ATCAGCTTTA TCCTATTATT TTTAATCACA
TTAGCTGGCT TTGGGATCTC GATGAGGCTG GAGACTAAAG TGGTGTCTGT TATCAGTTTA
GTCGGGGGCT CACTCGCTCC CATGATGCTG ATAACAGCTA GCCAATCTCC CCTGCTTTAT
CTTCCTTATC TGCTTATTAT TGGCGGCTGC GCACTTATAC AAAGTCGCAA GTTAAACTGG
CCTCCTCTAA TGGAGGTCAC CAGCTTATTG CATATCGCCT GTATCGAAGT CTTTATGCTC
TACTTAGGGC AAGCCTTCCC CTATTTAGAC TGGGAGATCG CGCTAGGGAT AATCTCTATC
TCAGGCATTT TCTATCTTTA TGGCTTTACT GGAATCTACT GGCTCCTTAA GTCTCGCTCA
GACGATAACC CTAACACCTC GCCATTAACG TCACGTATCC TAGCATTACC ATTTGCGCTG
ATCGCATTGG TGTTAGTCGC TAGTAGTCAA CTAACCCTGT TTGATGGAGA GGTTTTTCTA
ATAAACAGTG GAATATGTAT AGGTTTGTTT TTTATATTTC GTAACAGCTT ACAGATAAAA
AACATATCAT TAGTATTCGC TGGCAGTTTT GCAGGTTTTG CAGCACTAAA CCTTGTTAGT
CATGAATACT TGGGACTGGT TCTTCTATTG GAGGGCCTTT TACTACTCTG GCTTGGTGCA
AAAGAGAGAT TAACTTCAGT GCGTGCTGAA GCCTATGTGT TACTTGCCTT AGGTCTACTT
CTTAATATTT CAGGCATACT CAACTCGATA GATCTAAGCC CGTTTGGCTT TTCTAATTTC
GACATCTATG GCTTTACACT TATCTTGCTA CTGCTGACAA CAGCTACAAT CTACTCAATC
GGTCAACTTT TACAAAGGTA CCAAGGTGAC GAGAAGAAAC CTTACTTACT CCCCTATGAA
AGACAGATTT CATTACTCGT AAAAGAGCTT GTCAGTGTCG GCTATACAGC ATCCTTGCTC
TTTATTGCAG CATTAACCAG CTATGATTTT TCACTCAATT TTATCCCCTT GATCAGTTTG
CTTCTTCTCT ACTTAGCAGC AAGAGATAAG CTTAAATTCA CGGAGTTATT CGCTTGGCTA
CTTCTAGTGC CTCTGCTTCT TCAGATTAGC TTCGGCATCC TTGAGTCGGG CAGCTTCAGC
TTTCGCCATC AAGCACTCTA TGCACAGATT GCCAGAGTTG AGCTGTTTGC AAGCTTAATC
TTGGCTTACT ACTGGTACAA GCGTCACTTT AGTGATTCCA AATTGGTTCA ATTTGCTGGA
GTGGTTCAGC TTGTTTGTTT TATCTGTTTA CCCTTACTCT TTATTCCTAA AGTCATCAGG
GAGTATGGAG AGTACATCAG TTTAGCGCTC TGGTTAAGCT GCTTTATCAG TCTAATTCTC
GCACGTGTTA TAAGACACAG AGCCTTAATA TTTGAAGCTA AGATCCTTAC ACTTATCGCC
ATTTCAAGCA CTGCATTAAG CTGCCTCGAA CATGAATGGC AAGGGCTAAT AGCGTTAACT
ATTGGCGCTA TAATGATGAG CTTACTGCTT GTGCGCTACC AGCAGTTAGA CAGACTTTCA
CAGCGTATAC TCACTTTTCA GTGGCAGTTA AGTCCCTTCT ATTTTGGGTT GGTAACAGCT
GTATTAGTTC AAAGCCTTGT CGGTATCTGG CTAAGCCATT GGGGAGTCGT GGCAGCAGTA
TTGTCTGGGT ACTTTGCTTG GCTTATCAGT TTAAAACCGA TCCCAGCCGT ATTGAAGCCC
GGCGTGAGTG TCGCGTATGG TTTAACCTTG GTTTTCGCCA TCGCTCCTCT GCTTATCCAT
AAAGAAACCT ACATCGCTTC CGGTGTTGAA AACTTGCTAT TTTGCCTCTC TGAAGCAACA
ACTCTGGGGG TATTAGCTTG GCTTGTTTTA AACAATGGAT CAGTCATAAG AGCCCATAAA
GCACAGCTTC CTTTAGTCAT TTTACACTGG GGATGGCATC TGCTATTAGG GATAAATTAC
ATGATGTGGA GCTACCAACT TCCCCATGAA TTTGCTGCCC CTATTAGTGC TATTTTACTC
GTGATTCATG GCTGTGCATT GATGTTTATT AGCCTTAATC CTAAACAGGC ACAGATAATA
AAACTAGCAG GTCTTTTATT TGCTTTGGCA TGTTTTAAAG TCATCTTTGT CGATATGGCC
AACTTCGAAA TAATTCAAAA AGTGGTCGCC TTTATGATCA TCGGAGCCAT ATTGCTTTCT
GTTTCCTATT TCTATCAAAG GGCCAGAAAC CAACAAAACT AA
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| Protein sequence | MQLKDELLEL RAELDKLRCE QTEQQQGLTS QLDRLSSKLD SLQLKVNTQA LDTSDNDLAV
SMEEQSSQTT RAIETVTPTK QADAYQQVTI DPWSETELTP PSQHQTRKAK SGASTELAAQ
LSQSAAQLSD SLISLLGPLS GIFNQIKSFY QHYQGRGQGP VFLMTVAGII TLTLGFGYLL
QYSINNWFSE LGKALFGFAS ANAFIAIGAF IHKKRPGMQD FASSLVGLGL ILNFLSAYFI
GPYFGLIPTS ISFILLFLIT LAGFGISMRL ETKVVSVISL VGGSLAPMML ITASQSPLLY
LPYLLIIGGC ALIQSRKLNW PPLMEVTSLL HIACIEVFML YLGQAFPYLD WEIALGIISI
SGIFYLYGFT GIYWLLKSRS DDNPNTSPLT SRILALPFAL IALVLVASSQ LTLFDGEVFL
INSGICIGLF FIFRNSLQIK NISLVFAGSF AGFAALNLVS HEYLGLVLLL EGLLLLWLGA
KERLTSVRAE AYVLLALGLL LNISGILNSI DLSPFGFSNF DIYGFTLILL LLTTATIYSI
GQLLQRYQGD EKKPYLLPYE RQISLLVKEL VSVGYTASLL FIAALTSYDF SLNFIPLISL
LLLYLAARDK LKFTELFAWL LLVPLLLQIS FGILESGSFS FRHQALYAQI ARVELFASLI
LAYYWYKRHF SDSKLVQFAG VVQLVCFICL PLLFIPKVIR EYGEYISLAL WLSCFISLIL
ARVIRHRALI FEAKILTLIA ISSTALSCLE HEWQGLIALT IGAIMMSLLL VRYQQLDRLS
QRILTFQWQL SPFYFGLVTA VLVQSLVGIW LSHWGVVAAV LSGYFAWLIS LKPIPAVLKP
GVSVAYGLTL VFAIAPLLIH KETYIASGVE NLLFCLSEAT TLGVLAWLVL NNGSVIRAHK
AQLPLVILHW GWHLLLGINY MMWSYQLPHE FAAPISAILL VIHGCALMFI SLNPKQAQII
KLAGLLFALA CFKVIFVDMA NFEIIQKVVA FMIIGAILLS VSYFYQRARN QQN
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