| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3840 |
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| Symbol | |
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| ID | 6118189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4685475 |
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| End bp | 4687046 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641635403 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_001762194 |
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| Protein GI | 170728168 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4146] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.455986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAC TTTCAACATT GGATGTCGGT ATTTTTATCG TCTACGTACT TGGGCTCATT
GCCATCGCCT ACTTTGTGTC ACGGGAAAAA ATGGGCCACA AAAAAGATGC CAGTGATTAC
TTCCTTGCGG GCAATAGCCT ACCTTGGTGG GCTATCGGAG CCTCGCTTAT CGCAGCGAAT
ATCTCAGCCG AACAGATAAT CGGGATGTCA GGCTCAGGTT ATGCCATGGG ATTAGCGATC
GCCTCCTATG AGTGGATGGC GGCAATCACC TTGATCATAG TCGGTAAATA CTTCCTGCCT
ATCTTCTTAA AAAACAAGAT ATTCACTATG CCTCAGTTCC TTGAGCAGAG ATTCAATCAC
AATGTTCGTA TGGTGATGGC GTTTTTCTGG CTTGGGGTCT ACATCTTAGT TAACCTCACC
GCCATCCTTT GGCTTGGCGC ACTGGCCATC AACACAGTCA CTGGCGTGGA TATCACAGTG
GCCATGGCAT TCCTTGGTCT CTTCTCCCTC GCCTACTCTC TCTATGGTGG CCTAAAAGCG
GTCGCCTACA CCGACATTAT TCAGGTGGTA CTCTTGGTGT TTGGTGGACT CTTCCTCAGC
TACACCACCC TCAATATGAT CAGTAATGAC AACGGAGTGT TCCAAGGTTT TGCGCTTCTT
CTTGAACAGG CACCACAGAA GTTCGACATG ATCTTAAGCC CAGAGCATGA GCACTATATG
AGCCTACCTG GACTCTCAGT TCTGCTTGGC GGCATGTGGA TCATGAATAT CTCCTACTGG
GGCTTTAACC AATACATTAT TCAGCGGGCA CTGGCCGCAA AGAGTTTAGG AGAGGCGCAA
AAAGGGATCG TATTTGCTGC ATTTTTAAAG GTCTTAATGC CGGTTATCGT GGTACTGCCA
GGCATAGCCG CTTACCTGTT GATGCCAGAC TTAGAACCAG CAGATAAAGC CTACCCTATG
CTAATGAGCT TGATGCCATC GGGCATTAAA GGTCTGGTCT TTGCTGCACT GGTGGCTGCC
ATTGTCTCCT CACTGGGTTC GATGACCAAC AGTATCTCCA CCATCTTCAC CATGGATATC
TACAGCCACT ATCGCAAAGA GAGATCCCAG CAGCACTACG TGAAAGTGGG CCGCTTCGTC
AGCTTAGGCG CCATGATCAT CGCCCTATTG ACCACCCGCC CTCTATTAGG CGAGTTAGAT
CAAGCCTTCC AATACATTCA AGAGTTTACC GGCTTCTTCA CACCGGGGAT CGTGGTGATC
TTCGTGATGG GCATGTTCTG GAAGCGCACC ACCTCTAAAG GAGCACTCAC CGCCGCCTTA
GGTTCAGCCG TGCTCTCACT CACCTTCAAA CTCGCGTTGC CAGACCTGCC TTTCATGGAC
AGAGTCGGCC TAGTCTTCGT GGCTTGTTTG CTACTAGCAG CTGTGGTGTC TCATTTTGAT
AAAGGAGCTG CGCAAGAGCA GAATCAGTCA GTGGATATCG ACAGCGTAGA GTTTGCCACA
AGCCGCTCCT ATAACGTCTC AGCCATGGCA GTTATTTTGA TTGTCGGCGC GTTTTATGTG
TGTTGGTGGT AG
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| Protein sequence | MQQLSTLDVG IFIVYVLGLI AIAYFVSREK MGHKKDASDY FLAGNSLPWW AIGASLIAAN
ISAEQIIGMS GSGYAMGLAI ASYEWMAAIT LIIVGKYFLP IFLKNKIFTM PQFLEQRFNH
NVRMVMAFFW LGVYILVNLT AILWLGALAI NTVTGVDITV AMAFLGLFSL AYSLYGGLKA
VAYTDIIQVV LLVFGGLFLS YTTLNMISND NGVFQGFALL LEQAPQKFDM ILSPEHEHYM
SLPGLSVLLG GMWIMNISYW GFNQYIIQRA LAAKSLGEAQ KGIVFAAFLK VLMPVIVVLP
GIAAYLLMPD LEPADKAYPM LMSLMPSGIK GLVFAALVAA IVSSLGSMTN SISTIFTMDI
YSHYRKERSQ QHYVKVGRFV SLGAMIIALL TTRPLLGELD QAFQYIQEFT GFFTPGIVVI
FVMGMFWKRT TSKGALTAAL GSAVLSLTFK LALPDLPFMD RVGLVFVACL LLAAVVSHFD
KGAAQEQNQS VDIDSVEFAT SRSYNVSAMA VILIVGAFYV CWW
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