Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3835 |
Symbol | |
ID | 6118184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4678090 |
End bp | 4678656 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635398 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001762189 |
Protein GI | 170728163 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAG AGACCTTGAT ATACAAGACC TACCTAGCCT CAAGAGAGGG AATTGCTCGG GTGGTTTCCC GCATTGTTCC TCCCCATGAG ATTGAGGATA TTGTGCAGGA GACCTATGTA CGTTTATGTC AGGTAGAGAA TAAAGAAAGC ATTAATTCTG CCAAGTCATT TATGTATAAG ATGGCGAGAA ACTTGGCTCT TGATCATCAA AAGCGGGCAA ATGTGAGATT AGTGGACAGC GTTGATGATT GGCATGAGTT TGAGAAGGCG CTGTGTGACC GACATGATGA AGTGTATGAC AAGGCAATTA CCAGCCTTGA GTTCGATAAC TTCTGTGAAG CGGTGCGATT GTTACCGCTG CAGTGTCGTA AAGTATTTGT GCTAAAAAAG GTGTATGGCT ACTCTCAGCG AGAGATTGCC GAGGAGCTCG AATTGAGTGA GAGTACAGTT GAGAAGCATA TCTCTCAGGG GATTAAACGG TGTACAGTTT TTATGCGACA AGCACAAAAG GGCAAGACTC AGGTGAGTGC GACAACATCA GGCAAACGTG GAGGTGCTCA TGAGTAA
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Protein sequence | MLKETLIYKT YLASREGIAR VVSRIVPPHE IEDIVQETYV RLCQVENKES INSAKSFMYK MARNLALDHQ KRANVRLVDS VDDWHEFEKA LCDRHDEVYD KAITSLEFDN FCEAVRLLPL QCRKVFVLKK VYGYSQREIA EELELSESTV EKHISQGIKR CTVFMRQAQK GKTQVSATTS GKRGGAHE
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