| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3806 |
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| Symbol | |
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| ID | 6118155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4644832 |
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| End bp | 4646634 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641635369 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001762160 |
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| Protein GI | 170728134 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0299153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAC ATCTTCACTA TAGCTTGGTC AGCTATTTAG TGTTTACGCT TGGTCTTCTC
TTTAACTCGG AGGTCTATGG TGAAACCTGT CTAGCCAGTA ATAATGAGAT TAAAGATACC
AGTCAAAAAA TCTTAATTTG CCAACAGCAA CTCAATGACA TTGCCCATGA TTCTGATGAC
TACTACACCC TCTCACTTTC CCTTGCAAAG CTATACCAAC AAACTGGGGA TCTCAACTCG
GCTAGAAATA TGCTCAGCCA AGTACTCAGT GAATATAGTA AAATTAGTGA AATCGAACAG
ATCAAAGTAA ATAGACAGAT GGGAGTTATC TATTTTCATC AGCGGGTATA TGAGCAGGCC
TTTAATGCTT TTGAGCAAGC ACTCAGTTTA TCGATAAAAC TAAAGAACAG CTCATTTATT
GCACTTGGCT ATAATGATCT GGCCAATATT TACCATATCT ATGGCGATCT TGAAACCAGC
ACCAGCTTGC TCTTAAAAAG CTATGACATC CATACAGCTG AAAATAATGA ACTGGGCCAA
GCCAGCGTTC TCAATAATTT AGGCTCTGTC TATAAAGATA AAGGCGATTA CAATGAAGCT
ATCGTCTCCT ACCGAAATGC TTATACCATC TACACTCGAT TAGGCCGTGA GGTGCAAGCC
GCCCTTACTC TTTCCAATTT AGGTGAAACC TTTCAGTTAA ACGGTGATCC AGACAAAGCC
ATCGAACTGT TAACTCAATC CGTTGATAGC CTGAAACAGC TCAACTCTTT TAGGTTTTTA
GCTGAGATCT ATATTTTACT CGCTGAGATA TCAGTCAACA GTGTGTCAAC TGAGCAAGCA
CAATATTGGT TAAACCAATC CAGACTCACA ACCAATTTGA TTCAATCCTC AGAGAAGAAC
CCCAAGTACT GGTTCGTTCA AGGCCTAATA TGGGAGAAGA GAGATCAACT CGATAAAGCC
GCCGAAAACT ATGAAAAGGC TTTCGAACAG GTCAATCAAC ACAAGGAATA TCCATTTCAG
AAGCAACTTT ACACGGCGAT GGCCGAGCTT AGTGAACAAG TTGAAGATTA TGAAGCATCG
AGTAAGTACT GGCGTATCTA TGCCGATACT CTCAACTCAC AACTGACATT GAAGAACACC
ATACATTCGA AGAATATCCG CAGCACCTTT ACCTTTGAAG CTGGTGACTC ATCGAACTTA
GAAGTCGGTA AAATCTCTAC TCTTATCTTA GTGACACTAA TTATTTCAAT CTCTTGCTAT
ATCTTCATTA TCAGACGAAA TAGGGGCATT CACAGAGCAA GCAAAGAGAA CATTGAGCAA
TCGGAGATAA CATCCACAGT ACCAGAGCTG GAGACTCCTG CCACTGAGTC AGTAACAAAG
CAAAGATCAC CAAGCTCTCC TCCTTCAACA TCTAGCTTAA GTGAGAGTGA ACAGGCGGAA
CAGATCAGAC TTCAACTAGT AGAGTTAATG CACTTAGCCC TACAGATGTG GGAGGAGTCA
ACTCAAACAG GTAAGCTAGA ACTCGCCCAA CAGAGTAAAA TTTGGAGTGT CGGTATTGAT
GATGGCCGTA TAAGAGCTAG AGCCATGGAG CGTTATTTTG GCCTCAATAC CCTACCACAA
AAACCCAGAT GGCGCTCAGT AGTGCGCACC TGTAACTACG TATTGCAAAA GTGCGAAGGG
AAAAGTCTCT ACCGAGAGGA GTTAGAGACT AATTTAAAAA CCTTTCAGAA TAATATTAAA
AGAAAGGCGA TCATTGACAG CAAAAACCCG AGCAGTGACG AAGATAGTTG TACAGAGCAT
TAA
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| Protein sequence | MFKHLHYSLV SYLVFTLGLL FNSEVYGETC LASNNEIKDT SQKILICQQQ LNDIAHDSDD
YYTLSLSLAK LYQQTGDLNS ARNMLSQVLS EYSKISEIEQ IKVNRQMGVI YFHQRVYEQA
FNAFEQALSL SIKLKNSSFI ALGYNDLANI YHIYGDLETS TSLLLKSYDI HTAENNELGQ
ASVLNNLGSV YKDKGDYNEA IVSYRNAYTI YTRLGREVQA ALTLSNLGET FQLNGDPDKA
IELLTQSVDS LKQLNSFRFL AEIYILLAEI SVNSVSTEQA QYWLNQSRLT TNLIQSSEKN
PKYWFVQGLI WEKRDQLDKA AENYEKAFEQ VNQHKEYPFQ KQLYTAMAEL SEQVEDYEAS
SKYWRIYADT LNSQLTLKNT IHSKNIRSTF TFEAGDSSNL EVGKISTLIL VTLIISISCY
IFIIRRNRGI HRASKENIEQ SEITSTVPEL ETPATESVTK QRSPSSPPST SSLSESEQAE
QIRLQLVELM HLALQMWEES TQTGKLELAQ QSKIWSVGID DGRIRARAME RYFGLNTLPQ
KPRWRSVVRT CNYVLQKCEG KSLYREELET NLKTFQNNIK RKAIIDSKNP SSDEDSCTEH
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