| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3794 |
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| Symbol | |
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| ID | 6118143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4633340 |
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| End bp | 4633939 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641635357 |
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| Product | phosphoesterase HXTX |
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| Protein accession | YP_001762148 |
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| Protein GI | 170728122 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000338063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAAACGAT TATTTCTCGG TATTGCACCG ACTCAAACTC AAAACAGACA GCTGTCGGCC
CTACAGGCTG GGCTATCACT TGATGGTAAA AGCATCTCGC CGAAAAACTT TCATATGACT
TTGGCCTTTC TTGGACAACT TGATATACAC CAACAGTTCA AATTGCAGCA TAAACTCGAC
ATTCTCCATG CTTCAAAAGC GTTAAGCTGG CCAAGATTTA CGGTCACCTT AGACACATTA
ACCCTTTGGC GAAAACCTCA GATACTCTGT CTATCTGGAA AAATACTCGA TCCCAATCTG
CAATATATCT TAGATGAGTG CCACTCACTT CTGCAGCAGG TAGGTATTAA GCTCCCTCAT
CATCAGCATA TAAAAGCTAC ACAAAACTCC CTGCCACAAG AAGTTAATTT TGTTCCCCAT
ATCAGCCTAT TTAGGAAAGC AAAGCAGTTA CCAATTATGC GTGAAGCTAT CGCCCTTACT
CTTTGCCCAA AGAAGATCCA TCTCTATGTT TCCGTCAGTA AGCCCACAGG TGTCGAATAT
CAGATCTTAC AATCTTGGCC ATTCGCAGAG ATAACAGGCA AAAAAAATGC TGCCGATTAG
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| Protein sequence | MKRLFLGIAP TQTQNRQLSA LQAGLSLDGK SISPKNFHMT LAFLGQLDIH QQFKLQHKLD
ILHASKALSW PRFTVTLDTL TLWRKPQILC LSGKILDPNL QYILDECHSL LQQVGIKLPH
HQHIKATQNS LPQEVNFVPH ISLFRKAKQL PIMREAIALT LCPKKIHLYV SVSKPTGVEY
QILQSWPFAE ITGKKNAAD
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