Gene Swoo_3789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3789 
Symbol 
ID6118138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4625165 
End bp4625692 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content45% 
IMG OID641635352 
ProductFMN-binding domain-containing protein 
Protein accessionYP_001762143 
Protein GI170728117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000077872 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000492054 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATGAAAC CTCTCCAAAC ACTGATCTTC ATTGCTGCGT CAATACTGAG TATTGCTGTT 
CTGGCTAAGA GCCAATACCA AGCCCCTCAA GACTTTATCA GCCAAGCCTT TAACGCTCCT
GCTCCTAAAG CGAAAGTTTT CTGGCTCGAT GATGAAGCCC AAAAGGTGAT TGAAGAGATC
TTATCTCACA AATTTAGAAA GATGCGGATC CGCTACTGGC AACAGGAAGG AGAAACAGTC
TGGATACTAA ATGAGATAGG TAAAGAAGCG CCAATCACAG TGGGGATTCA TATCAAAGAC
CAACAGATAG CCCAGACAAA AGTGCTGATT TATCGAGAAA GTCGCGGTGA CGAAGTGCGC
CATGATTTCT TTACCGATCA ATTTAAAGCC GCCAAGCTCA ATGAAGATCT CAAGCTAGAC
AGGCATATCG ATGGGATCAC CGGAGCCACT TTATCTGTCA GAGCCTTAAC TAAGCTTTCC
CGCATTGCCC TTTGGCTAGA CTCACGGATA AGAAGAGAGA TCACCTGA
 
Protein sequence
MMKPLQTLIF IAASILSIAV LAKSQYQAPQ DFISQAFNAP APKAKVFWLD DEAQKVIEEI 
LSHKFRKMRI RYWQQEGETV WILNEIGKEA PITVGIHIKD QQIAQTKVLI YRESRGDEVR
HDFFTDQFKA AKLNEDLKLD RHIDGITGAT LSVRALTKLS RIALWLDSRI RREIT