Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3789 |
Symbol | |
ID | 6118138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4625165 |
End bp | 4625692 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635352 |
Product | FMN-binding domain-containing protein |
Protein accession | YP_001762143 |
Protein GI | 170728117 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000077872 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000492054 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATGAAAC CTCTCCAAAC ACTGATCTTC ATTGCTGCGT CAATACTGAG TATTGCTGTT CTGGCTAAGA GCCAATACCA AGCCCCTCAA GACTTTATCA GCCAAGCCTT TAACGCTCCT GCTCCTAAAG CGAAAGTTTT CTGGCTCGAT GATGAAGCCC AAAAGGTGAT TGAAGAGATC TTATCTCACA AATTTAGAAA GATGCGGATC CGCTACTGGC AACAGGAAGG AGAAACAGTC TGGATACTAA ATGAGATAGG TAAAGAAGCG CCAATCACAG TGGGGATTCA TATCAAAGAC CAACAGATAG CCCAGACAAA AGTGCTGATT TATCGAGAAA GTCGCGGTGA CGAAGTGCGC CATGATTTCT TTACCGATCA ATTTAAAGCC GCCAAGCTCA ATGAAGATCT CAAGCTAGAC AGGCATATCG ATGGGATCAC CGGAGCCACT TTATCTGTCA GAGCCTTAAC TAAGCTTTCC CGCATTGCCC TTTGGCTAGA CTCACGGATA AGAAGAGAGA TCACCTGA
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Protein sequence | MMKPLQTLIF IAASILSIAV LAKSQYQAPQ DFISQAFNAP APKAKVFWLD DEAQKVIEEI LSHKFRKMRI RYWQQEGETV WILNEIGKEA PITVGIHIKD QQIAQTKVLI YRESRGDEVR HDFFTDQFKA AKLNEDLKLD RHIDGITGAT LSVRALTKLS RIALWLDSRI RREIT
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