| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3787 |
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| Symbol | |
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| ID | 6118136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4621326 |
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| End bp | 4623581 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635350 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001762141 |
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| Protein GI | 170728115 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000153626 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000099878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATAATCA ATCCCATTAA CATTAAGTGG GATGGTTCGA CGTTCATACC TAATACGGAG
CACCTAATGT CACACCGTAC GACGCTATCT TTAAGTCTAA TTTCAACGGC ACTCTTTACA
GCACTTTCAC CTCAGGTCAT AGCGCAAGAG ATAGACTCTC AAGCGACCAT TGAACAGATA
AGTATCTTCG GTGAACGTAA CCCACTTAAT ACCGTTCCTG GCAGTGCACA TCAAATTGGC
CAAGCCGAGT TAGATACCTT CAAATACACA GATATCATGC GCACCCTATC CAGCGTACCT
GGTGTCTATA TTCAAGAGGA AGATGGTTAC GGTTTAAGAC CCAATATAGG TATGCGTGGT
ACTGGCCAAA ACCGTTCAGA AAAGATCACC ATCATGGAAG ATGGCGTACT GGCAGCACCA
GCACCCTACG CCTCACCTGC CGCCTATTAC TTTCCAACTC CAGGCAGAAT GCAGTCTATT
GAGATCCTAA AAGGTAGCTC TACCGTCAAA TATGGTCCAA GAACCACAGG CGGTGTACTC
AACATGATCT CTCGTCAGAT CCCTGAAGAG GAGTTAGCTG GCCAGCTAGA TATTGCGGCA
GGTCAAGATG GCTTTGGCAA AATACACGCT TATGCTGGTG GTCAAGGTGA GCGTGTCGGC
GCCGTAGTGG ATCTCTACCG CTATCAAGCC GATGGGTTTA AAGATATCAA TGGCGTTGGT
GGTGACACAG GCTTTGAGAA AAATGATGCG CTGGCAAAAG TGAGCATTCG CTCAGCTGAG
GGCGCTCAAT ATGAGCAGAT AGTCGAGTTT AAACTTAAAT ATTCAGATGA AGTATCCAAC
GAAACCTACA TGGGGCTAAC CGATGCTGAC TTTGATGCAA CCCCCTATGC ACGTTACTCT
GCTTCGCAAA AAGATGTAAT GAATACCGAG CATAAACAGC TGCAGATCAA TCATATCATC
GATTTCAGCG ATAACCTCAC CTTAGGCACA ACCGCCTATT ACAATGACTT TGCCCGTAAC
TGGTATAAAG CCGATAAAGT AGACGGCTTA AAACTGAGCA AAGGTGGTGT TGAGGCTGCA
TCAGCGTTTG ATAAAAATCC AGCATCTGCT CCAATGGATG TGCGTGTTAA AGCAAACAAC
AGAAGCTACA TCTCACAAGG TATTCAAACA GAGCTTAACT GGTACCTAGA TAATCACGAC
CTTGCCTTTG GTGCACGTTA CCATGAAGAT GAGATGGACA GATTCCAGTG GGCCGATCAT
TATGCATTAG ATGCTAATCA GGTAATGACT CGAACCGAAA GTGGCCTTCC AGGTAGCGAC
TCGAACCGCA TCGACAGCGC AGAAGCTATT GCGCTCTACG TTCAAGATAA GATCCAGCTA
GGCGATTTTA ATATTACCGC AGGACTTCGC TATGAAGATG TGAAGACCAA CCGTACCGAC
TGGGGTAAAG AGAACAGCGG ACGTGATGGT GAGCCAAAGA AAGATATTGA TAACAGTTTT
TCAGCAACCT TGCCTTCACT TTCGGTAACC TACCAGATAA ACAGCGATCT GCTGGTATTA
GCTGGTGTTC AAAAGGGCTT TGCTCCGGCA TCTCCAGGCA ATGCTGATAA AGTAGAAGAG
AAGAGCTGGA ACTATGAAGC TGGTGCCCGC TATAACAGTG GCGAATTTAG TTCAGAGGCG
ATCTTTTTCT ACAGTGACTA CAGCAATATG CACGGCGAAT GTACCGCTTC TAAAGGCTGT
GATGATGAAA ATATCGGTGA CCAATACAAT GGCGGTGAAG TCGATGTTAA AGGGTTGGAG
CTAAGTCTTG GCTATAGCTT TAACACACAA AACGATATCA GCTTCCCAGT AAAACTTGCC
TATACCTATA CTGACGCTGA GTTTGCCAAC AGCTTCGATT CAGATTTCGA TCCTTGGGGC
AACGTTGAGG AGGGTTATAA ACTTCCCTAT ATAGCAGAAA ACATGCTTTT TGCATCAGCT
GGAGTTAAAT CTGATAACTG GGAACTAACG TTAGCCGCAC GTTACACCGA TGATATTCGT
ACTAAAGCTG GCGAAGGTGA GATTGCTCAA GAGAACCTAA TCGAAGCTAA AACTATCGTC
GACCTATCGG GCCGTTACTT TATCAGTGAA GCACAGGAGC TTTACCTCAC AGCTGAGAAC
CTTTTCGATA AAAAATATGT CACTTCGAGA GTATACGGTT CCAACTTTGT AGGTAAGCCT
ATGACAGTCT CTGTCGGCTA TACGTATAAA TTTTAA
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| Protein sequence | MIINPINIKW DGSTFIPNTE HLMSHRTTLS LSLISTALFT ALSPQVIAQE IDSQATIEQI
SIFGERNPLN TVPGSAHQIG QAELDTFKYT DIMRTLSSVP GVYIQEEDGY GLRPNIGMRG
TGQNRSEKIT IMEDGVLAAP APYASPAAYY FPTPGRMQSI EILKGSSTVK YGPRTTGGVL
NMISRQIPEE ELAGQLDIAA GQDGFGKIHA YAGGQGERVG AVVDLYRYQA DGFKDINGVG
GDTGFEKNDA LAKVSIRSAE GAQYEQIVEF KLKYSDEVSN ETYMGLTDAD FDATPYARYS
ASQKDVMNTE HKQLQINHII DFSDNLTLGT TAYYNDFARN WYKADKVDGL KLSKGGVEAA
SAFDKNPASA PMDVRVKANN RSYISQGIQT ELNWYLDNHD LAFGARYHED EMDRFQWADH
YALDANQVMT RTESGLPGSD SNRIDSAEAI ALYVQDKIQL GDFNITAGLR YEDVKTNRTD
WGKENSGRDG EPKKDIDNSF SATLPSLSVT YQINSDLLVL AGVQKGFAPA SPGNADKVEE
KSWNYEAGAR YNSGEFSSEA IFFYSDYSNM HGECTASKGC DDENIGDQYN GGEVDVKGLE
LSLGYSFNTQ NDISFPVKLA YTYTDAEFAN SFDSDFDPWG NVEEGYKLPY IAENMLFASA
GVKSDNWELT LAARYTDDIR TKAGEGEIAQ ENLIEAKTIV DLSGRYFISE AQELYLTAEN
LFDKKYVTSR VYGSNFVGKP MTVSVGYTYK F
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