| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3782 |
|---|
| Symbol | |
|---|
| ID | 6118131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4612458 |
|---|
| End bp | 4613678 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641635345 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001762136 |
|---|
| Protein GI | 170728110 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00295666 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00018284 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTA ACCTACATCA GGCTGGGGTT AAGCTGTTAA AGCAGCTAGG CCGACACGCT
GATCTTATTA TGGATGTGTA TCTCTCGGGC TCTGTCTCTG AAGATGGCGA GAATGGGGCT
GCGATAGAGA AGCTGCGTAA GGCTGAGATC CTCTGGCGAC CTGAGCCTGA GCAAGAGTTA
CGCCTTAAAC GCTCAGTGAG AGCGCTTCTC GAAGAGGCCC TCAGTGATGA GCGTAATCGT
CAAATTGACT CCAATGTTGG CTCATCCTTA GCAAGTATTA AGACCTTAGC GGATCACTAT
AAAGAGGCGC GTCACAATGT CGATTTTGGT GCGTCAGAAG CTTATCTTGC GGATCTCAAT
GAGCATGTTT ACAGCTTTAC CGAAGGGTTA AGGTATTCAA TTCGCGTACT TTGGAGCCGG
ATCAATAATG AGTTTGGTTA TGTCGGCACC ATTAACGCCA AAATACGTGA AAATGAGCTC
GCGCAGAGTC AGGTAACAGA GCTACTCAAC GGTCTTGAGA TGTTCCAGTT TAGTGAGCTT
GGCGAAATCG CAGGTGATAT TAGAGAGCTG CGTAAGCTTT TAGTCACAAC ACTACAGGAG
ACCTTGAGCG ATTGTACTCA GGAGCTGAGC GTGGTTCAGG GGCGTTTACT TGAGTTGCTT
GGGCGTTTCC GTCAAATAAG AGGTCGAACT CGTCTGTTGA AAGGGTGGTT GCTTTATACC
GATCTACATC CTGACTATAA GCCGGCAGAT CATGTCAGCC ATAAACAGCT GCCCACTCTG
TTTAATCGTG CCGAAGCCAT TTTAGCGCCA GCAGCAGTGG ATGTGCATAA CACAAGTTAT
GAGCCTGAAC TGCTGGATAT TGTGTCACGG ATTAAAGCGA TTAGTCGCAC CTCACATGAG
CCAGTCGTTC GTGAGCATGA TGTGTCTGTT TCACTCAGTC AGAGCGAAGA TTTTGCTATT
CCAGATAATC CGCTTAAGTT AGCGGTAGAT GGTTATTTCT GCTCTGTGAT TGACTCAGGG
CGAAGCCAGT CGGCATTGGA GTATCTGCAG AGTAATGAAC TTCCTTGGGA TAGAGAGAGT
TGGCTTTATC AGGTTATTTG CGGTTATGAA GGCTTACCGC AAGAGCACAA AGACTATTTT
GAGCTGGAAC CTATCGGTGA GTCGGATCCC GTTTATACAG GTAACTTTAT CATCCGCGAT
GTTGAGTTAG GCTTCGCTTA A
|
|---|
| Protein sequence | MSTNLHQAGV KLLKQLGRHA DLIMDVYLSG SVSEDGENGA AIEKLRKAEI LWRPEPEQEL
RLKRSVRALL EEALSDERNR QIDSNVGSSL ASIKTLADHY KEARHNVDFG ASEAYLADLN
EHVYSFTEGL RYSIRVLWSR INNEFGYVGT INAKIRENEL AQSQVTELLN GLEMFQFSEL
GEIAGDIREL RKLLVTTLQE TLSDCTQELS VVQGRLLELL GRFRQIRGRT RLLKGWLLYT
DLHPDYKPAD HVSHKQLPTL FNRAEAILAP AAVDVHNTSY EPELLDIVSR IKAISRTSHE
PVVREHDVSV SLSQSEDFAI PDNPLKLAVD GYFCSVIDSG RSQSALEYLQ SNELPWDRES
WLYQVICGYE GLPQEHKDYF ELEPIGESDP VYTGNFIIRD VELGFA
|
|---|
| |