| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3779 |
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| Symbol | |
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| ID | 6118128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4607198 |
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| End bp | 4609249 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641635342 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001762133 |
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| Protein GI | 170728107 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.853209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00641465 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCGAT TTGGTTTATC AAGTGTCCTT TTCTTCTGGT TACTTATCAG TGTTATGGTA
CCGACGTTTC TACTCTCTGC TCTCTATCTT TCCTCTTTTA AAGAGACGTT ATTAGAGCAG
GAGCAGGAGC ATCTATCACA ATTTGCTGAT AAAAAAGTGA AGGAGGTGGA GGATTATATC
AGTGAGCGGA TAGCCGATGC TTTCACGTTA TCCCAGTCAG CGGAAGTAAT AGAGTTATTT
AGTCTGTTAT TGACCCATTA CCAGGTTGAC AGAGAGGGGC GTGACTATTT AGAGATATTA
CAAGATTATC AGGAGGTTTA TCAGCAATAC ACAGATTATG GCTATCTAGA TCTCCTTTTT
ATAACTCCAT CAGAGGAGGT GATTTTTTCC TTAACGGATA AACATAAGTT TGATAAAGAA
CAGCTTCCAG GCGAGGCTTT CTCCCATGGC CTGCATGGGG TAATACAGAA AGCGAAATAT
TTTCTTGAGT CATCCTCCTC CAGCTTTGAA TACTCACCTT TGTTAAAGCA AGCTACCGCT
TATATCGGAG CACCAATATT GCTAGATGGA AAATTGCTTG GGGTGATAGT GCTTCAAGTC
GATAGCCAAA TTATTCAGAG AGTGACTTTA GATGTGAGTG GAAACCTCTC TAGTCGGGAG
GTGGTCGTGG CTGCAAAACG AGGCAGTTAC TTCAGTTATC AAGCTCAGCT TAAGTATGAT
TCTGAAGTTA AAATTGGTGG CTTACAACCT GTATTTAAGT TACCTAAACC GCTCTCTAAT
GCGATATCTG GTCTCAGAGG GGTTGTATTT GCAGAGGATT ACAGAGGGGA GCAAGTGATC
GCGGCAACCC GCTATATCCC ATCTGTTCAA TGGGGGTTAG TGCTAAAGGA AGATCTCGAT
GATGTGATGT CGGCATATCA TGAGTTATTA AGGCTGAGTA TATTTATGTT TCTGGTCGTG
ATCTTCTGTG TCTTGTTACT GTCGGGATTT TTAGGTCGCT GGTTGGCTAA ACCTTTTGAG
TCCATGATAG AGATGACACA GGCGATCGCT TCAGGTACCA CGAAAAGTAC TATTTTTCCT
CAAGGAACAA AGGAGAGTTA TGCTCTGGCG TTAAGTTTTA ATCAGATGAC TCATTCTCTC
GCGTTGGCAA GGGAGACGTT AGAGCAGCAA GTCGAGGAGC GGACTCGGGA TTTAACGCAT
GAGATTAGTT TGAGGGAGAG TAAAGAGCGA GCGCTCACTG AGAGTTATAA GGAGCTCAAT
GAGTCAATGG AGCGATTGCA GTCTATGCAA TCTCAGTTGG TTGAGACCGA AAAGATGGCT
TCACTAGGTG GGCTAGTGGC AGGTTTTGCT CATGAGCTTA ATACGCCCAT TGGGGTTGCT
ATTACCGCTT CTTCGCTGTT TCTTAGAGAG TTAATTATCT TAGAGGAGTG CTATAAAAAC
AGTACATTAA CTGAAGTCGT TTTTGATCAG TACCTCAGTG AAATCAAAGA TACCTGTTTT
CTGCTGGATA AGAATTTAAA GCGCACGGCG TCTCTTGTGA GTAATTTTAA ATTGGTGGCC
GTAGAGCAAA CAAACCTGCA TAAGGAGAAA TTTGATCTCC GTGACTTAGT GGATTCACTG
TTAAAGAGCT TAACTCCCGA GACAAAAAAA TATCCGGTTG AGATAATCAA TGAGATCCCT
AGTGAGATCA TCATCAACTC CTATGCGGGC GATTTTTATC AGTTGTTAAC TAATCTAGTG
TTGAATGCGA TGATCCATGC ATTTGATGGT ATGAAGGAGG GGAGGTTAAC CATCTGTGCC
TCCCAGTGCC AATATAACTT AGTGCTTACA GTGGCTGACA ATGGTAAAGG CGTTTCGCAA
GATCATCTTT CCTGTCTTTT TGAACCATTC TTTACAACTC GTCGAGGCTC TGGAGGCAGT
GGACTTGGTT TGAGTATTGT TTATAACATA GTGACACATA AGCTTCGTGG TGATATTCAG
GTCAGCTCAA TCCCAGGGCA AGGTACTGAA TTTATCATCA CCTTCCCCAT AGATACTGAA
GAGCAATCTT AA
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| Protein sequence | MNRFGLSSVL FFWLLISVMV PTFLLSALYL SSFKETLLEQ EQEHLSQFAD KKVKEVEDYI
SERIADAFTL SQSAEVIELF SLLLTHYQVD REGRDYLEIL QDYQEVYQQY TDYGYLDLLF
ITPSEEVIFS LTDKHKFDKE QLPGEAFSHG LHGVIQKAKY FLESSSSSFE YSPLLKQATA
YIGAPILLDG KLLGVIVLQV DSQIIQRVTL DVSGNLSSRE VVVAAKRGSY FSYQAQLKYD
SEVKIGGLQP VFKLPKPLSN AISGLRGVVF AEDYRGEQVI AATRYIPSVQ WGLVLKEDLD
DVMSAYHELL RLSIFMFLVV IFCVLLLSGF LGRWLAKPFE SMIEMTQAIA SGTTKSTIFP
QGTKESYALA LSFNQMTHSL ALARETLEQQ VEERTRDLTH EISLRESKER ALTESYKELN
ESMERLQSMQ SQLVETEKMA SLGGLVAGFA HELNTPIGVA ITASSLFLRE LIILEECYKN
STLTEVVFDQ YLSEIKDTCF LLDKNLKRTA SLVSNFKLVA VEQTNLHKEK FDLRDLVDSL
LKSLTPETKK YPVEIINEIP SEIIINSYAG DFYQLLTNLV LNAMIHAFDG MKEGRLTICA
SQCQYNLVLT VADNGKGVSQ DHLSCLFEPF FTTRRGSGGS GLGLSIVYNI VTHKLRGDIQ
VSSIPGQGTE FIITFPIDTE EQS
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