Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3759 |
Symbol | |
ID | 6118108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4574602 |
End bp | 4575384 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641635322 |
Product | hypothetical protein |
Protein accession | YP_001762113 |
Protein GI | 170728087 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.553951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00446449 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTTAAAGC ATAAAGAGTA TCGAAGGGAA GGGCCCGATT ATCGCTTTGG TGAGCAGGTA AGCTTTAACG ATATAAAGCA AACCTTTAAT CTAAACCATA TCCGTATTGG TAGCTGGGTC GAAGAGGATG AGAAGCATAA AGCGGCTAAT CTTATTTTCG ACTCCTTAGC CGATCTTGCC TTTATTCTTA AACTTCCTCC CCATGCATTA GGCTTAAGGC AGACACTTAA CTTAGCATTT GGTAGTGGGG GGCAAAAAGG GGTACAAGCC CATTATATTC CGGCGCACCG TGAACTTGCT TTGGCAAAAA ATGCTGGGGC AGGAGCTTTA GCTCATGAGT TTTGGCACGC GTTTGATCAC TACATCTCGT CTAAGTCTTA CCATATATCT CCAGTAGGGA TATCTTTTGC CAGTCATTGT TGGCTCGCGG ATGTTAGGCC AATAGCGCAT CCGTTAAACC AGCGACTAGA GCAGGTATTT ACCACTGCAT TACTGACAGA TGATGGTGGT GACGCTAATG ATTTTGTCAC CCGTGGTCTA GCGCTCGATA AACAATATGG AGGGCAATAT TTTTCTAAGC CTACAGAGTT AATGGCAAGA GCATTTGAAG CGTGTATTGA ATCATATCCT GATATTAGTA ATCCCTATTT AGTCAATGAG ACCTTGACCT CTTCACTCGC GACTGCTGGT GGTTATCCAG ATCTTCAACA TAGAAAACAG ATTTTTGCTG CTCTTATCGG CTATTTTGAG CCTTTAGGGG AAGCCATTGA GCGTGAAAAA TAG
|
Protein sequence | MLKHKEYRRE GPDYRFGEQV SFNDIKQTFN LNHIRIGSWV EEDEKHKAAN LIFDSLADLA FILKLPPHAL GLRQTLNLAF GSGGQKGVQA HYIPAHRELA LAKNAGAGAL AHEFWHAFDH YISSKSYHIS PVGISFASHC WLADVRPIAH PLNQRLEQVF TTALLTDDGG DANDFVTRGL ALDKQYGGQY FSKPTELMAR AFEACIESYP DISNPYLVNE TLTSSLATAG GYPDLQHRKQ IFAALIGYFE PLGEAIEREK
|
| |