Gene Swoo_3759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3759 
Symbol 
ID6118108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4574602 
End bp4575384 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content44% 
IMG OID641635322 
Producthypothetical protein 
Protein accessionYP_001762113 
Protein GI170728087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.553951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00446449 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTAAAGC ATAAAGAGTA TCGAAGGGAA GGGCCCGATT ATCGCTTTGG TGAGCAGGTA 
AGCTTTAACG ATATAAAGCA AACCTTTAAT CTAAACCATA TCCGTATTGG TAGCTGGGTC
GAAGAGGATG AGAAGCATAA AGCGGCTAAT CTTATTTTCG ACTCCTTAGC CGATCTTGCC
TTTATTCTTA AACTTCCTCC CCATGCATTA GGCTTAAGGC AGACACTTAA CTTAGCATTT
GGTAGTGGGG GGCAAAAAGG GGTACAAGCC CATTATATTC CGGCGCACCG TGAACTTGCT
TTGGCAAAAA ATGCTGGGGC AGGAGCTTTA GCTCATGAGT TTTGGCACGC GTTTGATCAC
TACATCTCGT CTAAGTCTTA CCATATATCT CCAGTAGGGA TATCTTTTGC CAGTCATTGT
TGGCTCGCGG ATGTTAGGCC AATAGCGCAT CCGTTAAACC AGCGACTAGA GCAGGTATTT
ACCACTGCAT TACTGACAGA TGATGGTGGT GACGCTAATG ATTTTGTCAC CCGTGGTCTA
GCGCTCGATA AACAATATGG AGGGCAATAT TTTTCTAAGC CTACAGAGTT AATGGCAAGA
GCATTTGAAG CGTGTATTGA ATCATATCCT GATATTAGTA ATCCCTATTT AGTCAATGAG
ACCTTGACCT CTTCACTCGC GACTGCTGGT GGTTATCCAG ATCTTCAACA TAGAAAACAG
ATTTTTGCTG CTCTTATCGG CTATTTTGAG CCTTTAGGGG AAGCCATTGA GCGTGAAAAA
TAG
 
Protein sequence
MLKHKEYRRE GPDYRFGEQV SFNDIKQTFN LNHIRIGSWV EEDEKHKAAN LIFDSLADLA 
FILKLPPHAL GLRQTLNLAF GSGGQKGVQA HYIPAHRELA LAKNAGAGAL AHEFWHAFDH
YISSKSYHIS PVGISFASHC WLADVRPIAH PLNQRLEQVF TTALLTDDGG DANDFVTRGL
ALDKQYGGQY FSKPTELMAR AFEACIESYP DISNPYLVNE TLTSSLATAG GYPDLQHRKQ
IFAALIGYFE PLGEAIEREK