Gene Swoo_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3746 
Symbol 
ID6118095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4561401 
End bp4561775 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content44% 
IMG OID641635309 
Productcupin 2 domain-containing protein 
Protein accessionYP_001762100 
Protein GI170728074 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTTAA CGAATGAATC TGAGCACGAC TATCGATTTG GCGAATATGG CCCTAAATAT 
GTCACCAATG GTCCAAGAGT CGATTTCGGT ATTGTGGTGA TCACGCCAGG CGAAGCTCAC
CCTTGTCACA AACATGTCAA ACAGGAGGAG TCTTTCTTGG TCCTCGAAGG CGAATGTGCC
GTCTATGTTG ATGGTGTTCG AGTCTTGATA AAAGAGGGAG ATTACCTACG TTGTGAGCCA
GGAGAGTCAC ACCTGTTCCG TAATGAAAGC GATAAAAACT TCAAATCTGT CTTCGTTAAA
GCGCCTTACA TGGAGGAGAA AGACAGCGTC TATATCGACT GGCAACCAGG ACAAGAGTTT
ATTAAAGAGG ATTAA
 
Protein sequence
MYLTNESEHD YRFGEYGPKY VTNGPRVDFG IVVITPGEAH PCHKHVKQEE SFLVLEGECA 
VYVDGVRVLI KEGDYLRCEP GESHLFRNES DKNFKSVFVK APYMEEKDSV YIDWQPGQEF
IKED