| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3742 |
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| Symbol | |
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| ID | 6118091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4556074 |
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| End bp | 4557366 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635305 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001762096 |
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| Protein GI | 170728070 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTC CTCTTGTAAA TCGTTCAGTG ATGCTGTGGC CTGAGTCGTT ACAAACCGAT
ATAGATAAGC AGCTTATTGA GGGCTTAGCG AGTATCGGTT GGCAGTTTCA GACCAGCATT
TTTAAGAAAA GCAGTGCGGC TTCGGTCGGA TTGGCTTTTA TTGATCTCGC CTCCTTGGAA
CGATCTAGGG CTGTACTGGA GAAGGAGAAA CATTGCCAAT GGATAGTTAT TACAGCCCAG
GAGGAGCTAA AGCAGATAGC TAAGCGTCTC TCTTTGAGCA ATGTTTATGA CTATCACCAC
AGACCCGTGG ATATCGATAT TCTTTCCGCC ATGATAGGCC ACTGCATCGG TATGCAGCAG
CTCAATACAT CTGAGCCTGA GGTGCATACT GAGGGGCCAA CGAAATCCCT TAATCTATTA
TATGAACTGG CCTGTAAAGT GGCCAAAACC GATGTGACTT TACTGCTCCA GGGGCCGTCC
GGCAGTGGCA AAGAGTACTT AGCGCGCTAT ATTCACAAGA ACTCTGCTCG TCATACAGGA
CCTTTTGTCA GCTTAAATTG TGCCGGAATA CAAGCGACAT TAGCTCAAGA TGAGCTTTTT
GGTCATGAAA AAGGGGCGTT TACTGGTGCG GATCAGCAAC ATATTGGTGC CTTTGAACAG
GCTAATGGGG GAACGCTATT ACTTGATGAG ATAGGCGATC TACCAATGGA GTTACAGGGT
AACTTCTTAC AGGTCCTTGA AACTCGGCAT ATAAAACGAG TAGGCAGCAG TGTACTGCGT
CCCATTGATA CCCGTATCTT AGCTGCTAGC CATAGAAACC TGTTTGAACT TGTGCAGGAG
GGGCACTTTA GGTTAGATCT CTACTATCGG CTCAATGTTA TTACGTTGGA GGTACCACCG
TTGGCTGCGA GGCAAGATGA TATTTTGCCA CTTGCTCGCC GTTTTTTACT GGAGTTTGAA
TCAAATCATC ATGTTGCTAA GCGCCTCTCA TCCGATGCTG AGCGACAACT TTGTCTGCAT
TATTGGCCTG GAAATGTCCG CGAGCTGCAC AATGTGATCA CCCAAGCCGC TATCTTAGTC
GATGGAGATA TTATCTATGC CAAGGACATT CAGTTCAGCA CGCCCAGTGG TAGTGGTTCA
TCACTAAAAG AGCATCTTGA GAGGGCTGAG GCGGAGCATA TTCGTTCTGT CTTGCTAGCA
CATCAAGGCA ATCGGAATAA AGCGGCATTG CAATTGGGGA TCTCTCGTCA TACTCTCTAT
CGTCGCATCA AACAGCTTGA CGTTAACGCT TAA
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| Protein sequence | MTTPLVNRSV MLWPESLQTD IDKQLIEGLA SIGWQFQTSI FKKSSAASVG LAFIDLASLE
RSRAVLEKEK HCQWIVITAQ EELKQIAKRL SLSNVYDYHH RPVDIDILSA MIGHCIGMQQ
LNTSEPEVHT EGPTKSLNLL YELACKVAKT DVTLLLQGPS GSGKEYLARY IHKNSARHTG
PFVSLNCAGI QATLAQDELF GHEKGAFTGA DQQHIGAFEQ ANGGTLLLDE IGDLPMELQG
NFLQVLETRH IKRVGSSVLR PIDTRILAAS HRNLFELVQE GHFRLDLYYR LNVITLEVPP
LAARQDDILP LARRFLLEFE SNHHVAKRLS SDAERQLCLH YWPGNVRELH NVITQAAILV
DGDIIYAKDI QFSTPSGSGS SLKEHLERAE AEHIRSVLLA HQGNRNKAAL QLGISRHTLY
RRIKQLDVNA
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