| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3668 |
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| Symbol | |
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| ID | 6118002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4471573 |
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| End bp | 4472418 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635219 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001762025 |
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| Protein GI | 170727999 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.013804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGTTA AAGTATTTAA AACCTTTTTA GAGGTGGCGA AAACTCGCCA TTTTGGTCGG
GCAGCTGAGA ACCTATACAT CACTCAAGCT GCCGTGAGTG CTAGGATTAA GCAGCTTGAG
TCATTTTTCG ATCAAGTGTT GTTTATTCGA GATAGAAATA GCATCAAGTT GACGACATCA
GGAGAGAGGT TAATTGCCTA CGCTGAAGTG ATGGTGACCA CGTTAGCACA AGCTAAGAAT
GAGCTATCCC TTGCTGACAA TAGAAGCCTA CAATTGACCA TGGCTGGTAC TCCCAACATT
TGGGATGCGT ATCTGCAAGA GTGCTTAATT GAAGTAACAG AGGTGTTTAG TGGTTATGCT
TTTCAGGCCG AAGCCCTAAG TCGTGAACAA CTAAATCGGC AGTTGCTGGA GCGCACTTTA
GATATGGCGT TTGCGTTCGA GCCACTAAAA TGTGATGAGC TAGTTAGCCA GAAAGTGACA
GATATTAAGC TTGAGTTAGT ATCTACCTCT CAATGCTCAG TGGATGAAGC ATTGTCTCAG
CGCTATATTT ATGTTGACTG GGGGACTCGA TTCTCATCTG AGCATGCTGA GCGTCACAGT
CAGATGCCAG CGCCTTACTT GAGAACATCA ACGGGGCGCA TTGCGCTAGA GTTTATTTTG
CAAAAGGGGG GAGCTGCCTA TCTGCCAACG TCCATTTCAG CCCCTTACTT ACAAGATAAT
AGATTGAATC TTGTTAGGGG AGCAGAGCCG TGGGATAGGC CTGTTTACCT AAGTTATAGA
CGAGATACGT TACAGTTGGA TGCTATTGAA AAAATTGAGC GCTTGGTGAA AAAAAGTATC
AATTAG
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| Protein sequence | MDVKVFKTFL EVAKTRHFGR AAENLYITQA AVSARIKQLE SFFDQVLFIR DRNSIKLTTS
GERLIAYAEV MVTTLAQAKN ELSLADNRSL QLTMAGTPNI WDAYLQECLI EVTEVFSGYA
FQAEALSREQ LNRQLLERTL DMAFAFEPLK CDELVSQKVT DIKLELVSTS QCSVDEALSQ
RYIYVDWGTR FSSEHAERHS QMPAPYLRTS TGRIALEFIL QKGGAAYLPT SISAPYLQDN
RLNLVRGAEP WDRPVYLSYR RDTLQLDAIE KIERLVKKSI N
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