| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3658 |
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| Symbol | |
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| ID | 6117992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4457138 |
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| End bp | 4459822 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635209 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001762015 |
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| Protein GI | 170727989 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000529839 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.386646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTGGT TCCGTAAGAG TGCGGTATCT TTGGCGTGTA TCAGTGTTAT TTCCGGTTTA
TCCGGGCAAG CGTTTGCAGC CGATGATGCT CAGAAGCAAA ACAAGAAAGA AGAGATGGAG
GTCATTGAGG TGCGGGGGAT CAAGTCTAGC TTGAAAAAAG CCCTCAACGA TAAGCGATAT
GCCAATCAAG TGGCGGATAT GATATCTGCT GAAGATATCG GAAAACTACC AGATGAGAAT
GTCGCCGATG CACTTCAACG TGTGACTGGC GTCACTGTGA CCCGTGATTC CGGTGAAGGT
GCATTAGTCA GTGTGCGTGG TGTCGATCCA GGATTGACCA ATGTGACTGT CAATGGCCAA
AGTCAGGCTA GTGCTTCTAG CGAAGGGCGT GAATTCTCTT TTGATACGAT TGCTTCAGAG
CATCTGTCAG CTCTTCAGGT TATCAAAAGC CCTACCGCCG ATATGGAAGA GGGAGGGATT
GGTGCCACGG TAAACCTAGT GACTCGAAGA GCATTAGATT TTAAGGATAA TAAAGCTAAA
TTGTCGGCAT TTGCTGATTA CTCTGACTTA ACGGGTAAGA CTGAGCCTCG CTTGTCAGGC
ATGATTAGTC GTAAGAATGA AGATGAAACC TTTGGTTTTT TACTGTCTGC GAACCACTCT
GTACGTACCT TAAAAGAGGA AGCTTTACGT GGTTGGGGTT GGCGCGAGCA TAAAGTCGCA
GAGAAGGACG GTTTAGTTGA TGGCGCAGAA GTAGGAGATG AGTTTTCATA CTTGAATCGT
ATTCGTCATC AAAGTGGTAC TAAAGAGCGT ACCCGCACTG GTGCAACAGC CTCTTTTCAA
CTTCTTCCAT CAGATGACTC TGAGTTGTAC CTTGATGTGC TCTATAGCCA GTTAAATCAG
ATCCGTGACG AAACCTATTT AGAAACTCGA TTCCCTGTCG CTAAAAAGGC AAGCAATGCG
ATTTTAGATG GGTCTGATTC TGCAGTAATA AATGAGAACG GAACCTTAGT TGCAGGGCAG
GTAGATAGTG CTCAGGTGTT TAATAGCGCT TGGTATAATG AGGAGACGAC TGAAACCATT
ACAGCCACAT TAGGTGGAAG TTATATGCTC AATGATAATT GGGAGCTTTC ATCTGAAATT
GGTCATTCAC ACATAGAGCG CAATACTGAT AATAATATCC GCTCTACTGT TGAGGCAGAT
CAACGTTTTG ATCTGGACTA TTCACTTAAC GGCCAATTTC CTATTATCAA TTATTTCGAG
GATAAGAAAA AAGAAGCTAT TGGGCCTGAT AGTGTAGCCT TAAATCCAGG TGACAGTGAG
CTCTACCAGA ATAAGCCTGC GAATCTACGT GTGCAGTTAT TCAATATTGA AAATACCAAA
AGCACATTTA AATTTGATGT TAAAGGTGAA CTCGATTCTG AGTTTCTCAG TAGCGTTAAG
TTTGGCGCCA TGTTTAAAGA TCAGAACAAA ACTAGAATTA AAAATGAAGT TATAGTGAAA
AAGTTTGCTG GACGCAGTTT GAATGAGTTT TTTAATGACT CAGTTTCAGA TCTGTATGCA
GGTTCAGATG CCGAGCAATC TAGCTTAGCT TGGTCAAAAA CGGATCTATT TGCATTGCGT
GATGCTGCTG TAGAGGAGGG GATAGACTTA ACCACTAAGC CTATTGCTGA TTTTGCCTAT
GATGTTACCG AGCAGACTCA GGCTGCTTAT GTTCGTTTTG ATTATGCGAC TCAAGTGTTT
GGTGACATGC CCTTGAGAGG TAATTTTGGC GCTCGCTATA TCCAAACTGA TGTTGAATCC
AAAGGGATGG CTCTGGATGC TGATGAGAAA ACCCTTGTCG TAGACAGAAC CGTTGAGAAT
GATTACAGCG ATCTGCTGCC TAGCGTGAAC CTTGCACTGG GTTTATCAGA CGACCTTGTA
TTACGTGGTG CTGTCGCCAA AGTGATGTCT CGTCCGGCAC TGTCTGATCT GTCTGCTCAC
CGCGCAATAA GCGATATTGA TGGGGTTATC AAGATTCGAG GTGGTAACCC AGAGCTAGAC
CCTTACCGTG CTACTGCATA TGACTTGTCA TTAGAGTGGT ATTTTGATGA GGCTTCCCTC
TTTTCGGTGG CGGGTTTCTA TAAAGATGTC GACTCTTTTA TCTTTGATAC CCGAGTTGAT
TCTGTTAATG ACGATGGTCA GGATGTTGAA TTGATAACGC CGGTCAATGG AGCTGGAGCG
AAAGTTAAAG GGTATGAAGT TGCTTTCCAG CATATGTTTG ATTACCTACC AGGTTTGCTT
AATGGCTTTG GTGTTAACCT AAACTACACC TATCAAGATA GCGATGCAGA CTTTAGCCAA
GAGGGCGTGA GCAATAGTTT TGGTATGCCG GGGCTTTCCA AGAACAGCTA TAACGCCGTT
GTTTTTTATG AGAAAGACTC ATTCAGTACT CGTCTTGCTT ACAACTACCG TGGTAAGTAC
CTGTTAGATC CTGATGGTCG TCAAGATGAT GTGGTTTTTG GTGATGCTTA TGGTCAGCTG
GATTACTCGG TTAGCTACGA TATCTTGAAA AACCTAACTG TTAGCTTTAA TGCGATTAAT
TTAACCGAGG CGGAGCAAAG TCAGTTCTCA GAGTTTGATG AACGCTTGTA TGAAAACTAT
GTGTATGGTC GTCGATTCCA CTTAGGTTTG AGTTACCGCT TTTAA
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| Protein sequence | MAWFRKSAVS LACISVISGL SGQAFAADDA QKQNKKEEME VIEVRGIKSS LKKALNDKRY
ANQVADMISA EDIGKLPDEN VADALQRVTG VTVTRDSGEG ALVSVRGVDP GLTNVTVNGQ
SQASASSEGR EFSFDTIASE HLSALQVIKS PTADMEEGGI GATVNLVTRR ALDFKDNKAK
LSAFADYSDL TGKTEPRLSG MISRKNEDET FGFLLSANHS VRTLKEEALR GWGWREHKVA
EKDGLVDGAE VGDEFSYLNR IRHQSGTKER TRTGATASFQ LLPSDDSELY LDVLYSQLNQ
IRDETYLETR FPVAKKASNA ILDGSDSAVI NENGTLVAGQ VDSAQVFNSA WYNEETTETI
TATLGGSYML NDNWELSSEI GHSHIERNTD NNIRSTVEAD QRFDLDYSLN GQFPIINYFE
DKKKEAIGPD SVALNPGDSE LYQNKPANLR VQLFNIENTK STFKFDVKGE LDSEFLSSVK
FGAMFKDQNK TRIKNEVIVK KFAGRSLNEF FNDSVSDLYA GSDAEQSSLA WSKTDLFALR
DAAVEEGIDL TTKPIADFAY DVTEQTQAAY VRFDYATQVF GDMPLRGNFG ARYIQTDVES
KGMALDADEK TLVVDRTVEN DYSDLLPSVN LALGLSDDLV LRGAVAKVMS RPALSDLSAH
RAISDIDGVI KIRGGNPELD PYRATAYDLS LEWYFDEASL FSVAGFYKDV DSFIFDTRVD
SVNDDGQDVE LITPVNGAGA KVKGYEVAFQ HMFDYLPGLL NGFGVNLNYT YQDSDADFSQ
EGVSNSFGMP GLSKNSYNAV VFYEKDSFST RLAYNYRGKY LLDPDGRQDD VVFGDAYGQL
DYSVSYDILK NLTVSFNAIN LTEAEQSQFS EFDERLYENY VYGRRFHLGL SYRF
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