| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3609 |
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| Symbol | |
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| ID | 6117943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4404377 |
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| End bp | 4405363 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641635162 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001761968 |
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| Protein GI | 170727942 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.407775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAATG AGCCGGAAGC TGTATTAGAA TCAGTCGTAC AAATGACAGG GCAACGTCAA
CTTGATTCGT TGGCAGAAAG TTTAGTGTCA ACTGTTAGGC AGATGGTCAA TGCTGAACAA
GTTGAAATCT TTAAAATCGA TAATGATCTT GAGCTTGAAG ATGCGGTTGA AAATCTTACT
AAACAGGGCT TTCAAGTCTC TTACGGGGCA TTACTGGAGT GTTTAAGAAG TCGCTCTACC
GTTAGGCTCT CTACCCAAGT GTTCGAGCAA ATCGCTATCC CAATCTTGCT AAAAGATATA
GTGGTGATGA TCTTATGGGT GACGAGTGAT CAGCTCTCGG AGCAAGACTC ACAGATGCTT
AAAGGTTTCT CTAAAGTTTA TGAGAACTTC CTCTCTATCG TTATTGAGAG TGAAACAGAC
CCCTTGACTG GCTTGTTAAA CAGAAAGGCA TTTCTGCCTC GTTTGACGAA AGTGGCAAAG
TTAATTAAAC AGGAAGCGAT AGATTGTGCA CTCGATCCTG CGAGCTGTGA TCTGAGTGCT
AAGCGATATT GGCTGTGTAT CTTTGATATC GACAAGTTTA AAGTGATCAA TGATACCTTT
GGACATCTAT ATGGGGACGA GATCTTGATT GATCTTGTGA AGGTGATGAA AGCCACTTTT
AATGAACTCG ATAGTCTTTT CAGGTTTGGA GGAGATGAGT TTGTGGTCAT TTTATCTAAA
CGTGAGAAAG CAGAGATGCT CCACCTGTGC GAGTCCTTCT CTCATAAGCT CTCCATTCAT
CATGGGCGTG AAGTTAAAGT TACTATCTCT ATGGGAATTA TCGAAATTAA TAGCATTGAG
GAGCCAAGCG AGCTTTTAGT TAAGGCTGAC AAAGCCCTTT ATTACATAAA AGAAACGGGT
AGGGACCGAG TTGGGCTCTA TGAAGATCTT GTTGCAGATG GCTCTATCAT CCCACTTAAA
ATAGAGGATG ATATCGAACT CTTTTAA
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| Protein sequence | MPNEPEAVLE SVVQMTGQRQ LDSLAESLVS TVRQMVNAEQ VEIFKIDNDL ELEDAVENLT
KQGFQVSYGA LLECLRSRST VRLSTQVFEQ IAIPILLKDI VVMILWVTSD QLSEQDSQML
KGFSKVYENF LSIVIESETD PLTGLLNRKA FLPRLTKVAK LIKQEAIDCA LDPASCDLSA
KRYWLCIFDI DKFKVINDTF GHLYGDEILI DLVKVMKATF NELDSLFRFG GDEFVVILSK
REKAEMLHLC ESFSHKLSIH HGREVKVTIS MGIIEINSIE EPSELLVKAD KALYYIKETG
RDRVGLYEDL VADGSIIPLK IEDDIELF
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