| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3522 |
|---|
| Symbol | |
|---|
| ID | 6117854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 4298969 |
|---|
| End bp | 4299373 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641635073 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_001761881 |
|---|
| Protein GI | 170727855 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0517] FOG: CBS domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAC AAGTATCTGA AATAATGACA AGCAGGGTTG TCACCATAGA TATGGATGAT
AGATTATCTG TTGCTAAAGA GATCTTTGAT AATGCCCCCT TCCATCACCT GCTCGTTGTC
GAACATAATC AGCTGCAAGG GGTACTCTCT GAGCGAGACT TTTTACGTGC ATTAAGCCCG
AATATCGGCA ATATAAATGA GACAGAGCGT GATAGTGATA CTCTGCTCAA ACGTGCGCAC
CAAGTAATGG CTCGTAACCC CATCACAATT GAAGCCAAAG AGAACATCAA TTGTGCAAGT
AAGTTACTAC TTGAGCATGG AATAGGCTCA CTGCCTGTTT TAGAGCAAGG GGAACTTGTT
GGGATCATCA CATGGAAAGA TCTGTTGCGA GCCTACTCAG ACTAA
|
|---|
| Protein sequence | MDIQVSEIMT SRVVTIDMDD RLSVAKEIFD NAPFHHLLVV EHNQLQGVLS ERDFLRALSP
NIGNINETER DSDTLLKRAH QVMARNPITI EAKENINCAS KLLLEHGIGS LPVLEQGELV
GIITWKDLLR AYSD
|
|---|
| |