| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3426 |
|---|
| Symbol | |
|---|
| ID | 6117758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4190457 |
|---|
| End bp | 4190993 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641634981 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001761789 |
|---|
| Protein GI | 170727763 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAT GGATATTTTT TAAAGGATTT AAGATGAAGT GCCCTAGAAC CAATACAGAT
TTAACTTCCG TGAAAGTGGG TGGGATCACT GTGGATATCT CTGAAGCTTG TGGTGGTGTA
TTTTTTGATA ATCACGAGCT TGAGCATTTT GATGAGAAAC ATGAAAGGAG AGGGCAGGTA
CTTGTTGAGC ACCTTAGTCA GTTTGTGCCG CCACAACTGA ATTTAAGTGA GCGTATCTCC
TGTCCTAAAT GTACTGATGT GGTGATGGCT AGGCACTTTT ATAGTCCAGA ACATCTGGTT
GAAATCGATG AGTGTCCTGG GTGTGGCGGT ATATGGTTTG ATTATGCTGA ACTTGAAAAG
CTTCGAGAGC AATTTCCAAA TCAAAGAGAC AGGCAGAGAG TTGGAGAGAG GTTTGTCTCT
CAGATGGAAA CTAGCTCCCG TTATATCACT CATCAAAGGG AGCTGGAAAG CAAAGAGGAG
TTGGCTAGCC GTTTACGAAG AAGAGGGCTG TACTTCATCG ACTTTTTTCT AGAGTGA
|
|---|
| Protein sequence | MEKWIFFKGF KMKCPRTNTD LTSVKVGGIT VDISEACGGV FFDNHELEHF DEKHERRGQV
LVEHLSQFVP PQLNLSERIS CPKCTDVVMA RHFYSPEHLV EIDECPGCGG IWFDYAELEK
LREQFPNQRD RQRVGERFVS QMETSSRYIT HQRELESKEE LASRLRRRGL YFIDFFLE
|
|---|
| |