| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3311 |
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| Symbol | |
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| ID | 6117632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4052598 |
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| End bp | 4053491 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634856 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001761675 |
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| Protein GI | 170727649 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000434384 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGCAT TAAACGGATT ACTCTCCTCT TTTCACCTCA ATGCAACTAT CTTTCACCGC
TCACTCGTCT GCGATCCCTG GAGTACTGAT ACCTCAGGCT CAGGGCTTGC GAGCTTCCAC
CTCATCAGCT CAGGCAAAGC TTTTCTTTTT TGTGATGACT ATCAAGCAGA GCCTTTAACG
GCTGGCGATC TGGTGATCTT TCCCCATGAC TCACCCCATA TCATCAGCCA TAGTCCTGAT
AAACAAACAG CAAAAGAAAC TGACGGCTTT GTCGCTTACC CATTTAGCGA CAACACGCCT
CACTCTGCTG GATTAATGTG TGGCTATTTC GACTTTAAAG AGGACAGTTC TCACCCTGTG
ATTGCCCAGC TTCCCTCCTG TATTTTGATA AAATCACAAC AAAACCAAGG CGTGTTAGCC
AGTATCATTG AGAGCTTGAT TTTAGAAGTG ACACTTGGTG CTCAAGCCAG CGATATCATT
CTCTCTCGCC TTTGTGAAGT CTTCTTTCTC AGCCTATTAA GGCAACTTTC TGCTGAAGAT
AACTCGCAAA TGGGTCTTTT TCGCGCCCTA CAGGATACTA AGATGGCGAA GGTTCTTCAG
GCCATAGATA GTAACTTAGC CGCGCCATGG GATCTGAACT CACTTGCTAA TGTTGGTGGT
TACTCCCGAG CCAGTTTCAT CAACCACTTT AAAAACTATC TGGACACCAC ACCGCAAGAA
TACCTCTCAC AACTGAGGTT AACTAAAGCT AAGAAACAGC TTATTAGAGG TGATGCAGTA
TTAAAAGTTG CGTTAGATGT GGGTTATAGC AATGATGTAT CATTTGCTAA GGCTTTTAAA
CGCTACTTTG GTTACGGACC AGGAGTATGC AGGGCTAACA GCAGTTCCAG TTAA
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| Protein sequence | MSALNGLLSS FHLNATIFHR SLVCDPWSTD TSGSGLASFH LISSGKAFLF CDDYQAEPLT
AGDLVIFPHD SPHIISHSPD KQTAKETDGF VAYPFSDNTP HSAGLMCGYF DFKEDSSHPV
IAQLPSCILI KSQQNQGVLA SIIESLILEV TLGAQASDII LSRLCEVFFL SLLRQLSAED
NSQMGLFRAL QDTKMAKVLQ AIDSNLAAPW DLNSLANVGG YSRASFINHF KNYLDTTPQE
YLSQLRLTKA KKQLIRGDAV LKVALDVGYS NDVSFAKAFK RYFGYGPGVC RANSSSS
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