| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3259 |
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| Symbol | |
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| ID | 6117578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3995167 |
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| End bp | 3997299 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634803 |
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| Product | hypothetical protein |
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| Protein accession | YP_001761624 |
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| Protein GI | 170727598 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2843] Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.962957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATTA ACGCTACCCA TAAAAAGAAT AGCCGGATTT GTTTTTTTCT TTTCATTGTG
CTGTTTAGCC TGCCAGCACT GAGTGAGGTG ATCTCAGTGC AAGGCAGAGT GCTCGATGAT
GCCTCTCGGC CCATTAAAGG CGTTGTTATT GAAGTGCAGG GCTTAAGTAG GACAAGTACA
AATAGATTGC CTCCTTCTCA CAGCGTGACC ACTGATGTGA ATGGGCGTTT TACTATCAAT
CAACCTGAAT CTTTGTTTCA GTTAACGCTT GATAGCCAAG GTTTTTACCC CTCTATTCAC
TCTTTTAGTC TGAGGGAGTT GGTGCAAAAT GATGGCACTA TCCCGACCAT CAAGTTGACA
GAGAAAAGAT CTGGTCGTGT CATGTTAGCG TTTGGCGGCG ATGTCATGAT GGGCAGACGT
TTTTTTAAAC CTTACTTTGA TGATCCTGTA CAGCTTCATG ATAAGAGTCT GTTAGATGAC
AGTCGAAAAG TTGTGGAGCA GATGAAACCA TATCTGAGTT TAGCAGACCT TGCTGCGGTG
AATCTTGAGA CTCAAATTGC GACTGAGACG CCAGAGAAGA AAGCTAAAAA GTCGGTGGTT
TTCTTTAGTC AACCAGCGTT GTTATCAGCA CTTTCTTGGG CTGGAGTTGA CTATGTAACT
TTAGGTAATA ATCATACTTA TGATTATTTG GGATCTGGGC TGGATTCAAC ACTAAAATAC
CTTTCACAAA GTTCGTTAGG CTATTCTGGC GCGGGAAAAA CATCCAGTGA TGCATTAAAA
GCCCATAGAG AAATAATCAA TGGTCAGCCA TTTTCGATGC TGGGCTATGT CGGATGGGAA
GGCGGTGCGA AGATCGGTCA AGCGGCGACA GCAGATCATG GCGGCGCCGC ATATGGTAGC
TTAGAGAATA TCGTCTCAAC CGTGAAGCGT GAGATGAATG CGAGCCGTCA TACTGTGGTG
CAATACCATG GGAGTTTAGA GTATAAAAAC GAGCCTACTG GGGTGACAGA GCAGAGACTG
AAATCTGCGA TTGATGCTGG GGCATCGCTT GCTATAGCCC ATCATCCCCA TGTTGCTCAA
GGGCTAGAGT TATACCAAAA CCACTTGATT GCTTACTCCA TGGGTAATTT TATATTCGAT
CAAAATTTCA ATTCGACACA ACTCAGTTTT ATCTTGTATG TATGGCTTGA TGAGGGAGAG
TTTCACCGTG CTGAGATTGT TCCCATCTAT CTTAAAGGCT ATAAACCCAC CCCAGCTATC
GGTTTACAAC GATATTACGT GATGAAACGT TTATCTGAGC TTTCAGCAAA GCGAAATACT
TATATCAAGG GATCTGGAGG ACATGGGGTT ATCGAGTCTG ATAATAAAAG GGAGTTAAAA
GCGCAGTACA GTAAAACAGT TCAGCATAGT GGTAGTAGTC GGCTATTGAG CCTGAGCACT
TCACATTGGG GGGACAGGCT CACTGGCGTT GTGATGGAGG ATGAGCTGTT GCAGTATCGA
CTTGGGGTGA ATCTTATCAA TGGTAGCGAC TTTGAACACT ATGCTGATTT CGATAGCAGC
GACCGAACTT GGCTGATTGA TGCTAAAAGC TATCGCTTTA ATGTAGATGA GAGTAAAAAG
AGGAGCAATC TCAATGGTAA TACTAGCCTT GAGCTAACTG TTGATGAGCG AGCTTGGTTG
GGCATGAAGC ACTTTAGGCG TGTTTATAAC CCTAGTTCAC CGATGACGAT ACAGACTCAG
ATTAATACGG CGACACCTGC GACACTGAAT TTCTACTGGC AAGGGCGTAA AACGCGTCAA
AAACTTTTTG ATGCTTTTGA AAACAGTGAA AAAGAGTTGA TCCAGTCCGT GAATATATCG
GGTAAGAGAG GCTGGCAAAC CATTATTGCA GACTTTAACT CTCCAAGAGT TGGTTATAAA
AGCTACCGAG TGTTAGTCGA GGTCGTGCCA ACATATCAAG ATAGTCAAAC ACAGGAGCAA
ATCATAGAGT TTGACGACTT CTCTTTAATC GAGTGGCAAA GTGCTTATAG CAGTAACTCA
AAGCCTAACG GTTTCCATTT CGGTGAGACG CAAGCCAGTG TGATTGGTTT CAATAAAGCA
CCATTGCAGC CAGTAGTGTT GAATTTTAAT TAG
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| Protein sequence | MSINATHKKN SRICFFLFIV LFSLPALSEV ISVQGRVLDD ASRPIKGVVI EVQGLSRTST
NRLPPSHSVT TDVNGRFTIN QPESLFQLTL DSQGFYPSIH SFSLRELVQN DGTIPTIKLT
EKRSGRVMLA FGGDVMMGRR FFKPYFDDPV QLHDKSLLDD SRKVVEQMKP YLSLADLAAV
NLETQIATET PEKKAKKSVV FFSQPALLSA LSWAGVDYVT LGNNHTYDYL GSGLDSTLKY
LSQSSLGYSG AGKTSSDALK AHREIINGQP FSMLGYVGWE GGAKIGQAAT ADHGGAAYGS
LENIVSTVKR EMNASRHTVV QYHGSLEYKN EPTGVTEQRL KSAIDAGASL AIAHHPHVAQ
GLELYQNHLI AYSMGNFIFD QNFNSTQLSF ILYVWLDEGE FHRAEIVPIY LKGYKPTPAI
GLQRYYVMKR LSELSAKRNT YIKGSGGHGV IESDNKRELK AQYSKTVQHS GSSRLLSLST
SHWGDRLTGV VMEDELLQYR LGVNLINGSD FEHYADFDSS DRTWLIDAKS YRFNVDESKK
RSNLNGNTSL ELTVDERAWL GMKHFRRVYN PSSPMTIQTQ INTATPATLN FYWQGRKTRQ
KLFDAFENSE KELIQSVNIS GKRGWQTIIA DFNSPRVGYK SYRVLVEVVP TYQDSQTQEQ
IIEFDDFSLI EWQSAYSSNS KPNGFHFGET QASVIGFNKA PLQPVVLNFN
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