Gene Swoo_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3214 
Symbol 
ID6117533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3940937 
End bp3941344 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content42% 
IMG OID641634758 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001761579 
Protein GI170727553 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.521696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000258332 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGAGA TTGTTAGAAT TAATCATGTA GGGTTGAGAG TGAAGAGCTT AGCCATTTCA 
CGAGCATTTT ACGAAAAACT AGGTTTTGAG TTTATTGAGG GGCCGATTGG ACCTGAACCC
GTTGCTGTAA TGGAACACCC TTGTGGGATC AATATTAACT TTATTCTCAA TGGCTCTGAA
GATGAGGTGC TCAATGTGTT GATGGATGTG CCAAACAAGC ATACTGGCTT CACCCATATT
GCACTTGAGA TAAATGATAT TAAAGCTGTG CAGGAAAAAC TGGCTGAACT GGAGTTCCCT
GTTACCGAAG GGCCTATCAC TGTTCCAAGT GGCGCCATGT TTCTCTTTAT AAGAGATCCA
GATGACAATG TGATTGAGTT CCACTTACCA GCTAAACTCG CTAACTAG
 
Protein sequence
MKEIVRINHV GLRVKSLAIS RAFYEKLGFE FIEGPIGPEP VAVMEHPCGI NINFILNGSE 
DEVLNVLMDV PNKHTGFTHI ALEINDIKAV QEKLAELEFP VTEGPITVPS GAMFLFIRDP
DDNVIEFHLP AKLAN