Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3172 |
Symbol | |
ID | 6117491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3890007 |
End bp | 3890507 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641634717 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001761538 |
Protein GI | 170727512 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.13673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGTT TACAACTCAC ATCACTCGAA CTTAAAGCTC ATAGTGAGGC TGATTTGCCT TTTTTACTGC AGCTCTATAC CTCTGTTCGC CGCGATGAGT TTGCCGCAGC TAATTGGCCT GAGTCGCAAT TAAACCTTTT TTTATCTGAG CAGTTCAGCG CTCAGTACCG CTACTATTGT CAGCATTACA GCACTGACAG ATTCGACATT ATCTATTACC AAAATCAAGC GGTCGGTCGT CTGTTTGTTG ATTACTGGTT GGACGAAAAC CAAGAGATCC GTATTGTCGA TATCTCTTTG ATGCCTGAGT ATCGAGGGAT CGGGATTGCC AGTTGTCTGC TGGAACAGTT ATTTATTGAA GCTGAAACCT TAGGTTTGAC CGTGAGCATA CATGTGGAGC GAAATAACCC TGCCAGAGCG CTATATGAGC GTTTAGGCTT TAAGTTAAAA ACGCAGACGG ACGAAGTGTA TCTATTGATG GAGTGGCAAG CTGCAAGTTG A
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Protein sequence | MDGLQLTSLE LKAHSEADLP FLLQLYTSVR RDEFAAANWP ESQLNLFLSE QFSAQYRYYC QHYSTDRFDI IYYQNQAVGR LFVDYWLDEN QEIRIVDISL MPEYRGIGIA SCLLEQLFIE AETLGLTVSI HVERNNPARA LYERLGFKLK TQTDEVYLLM EWQAAS
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