| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3130 |
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| Symbol | |
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| ID | 6117449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3838698 |
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| End bp | 3839846 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634675 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_001761496 |
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| Protein GI | 170727470 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00420648 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTACTTTC TTGACTCAAC CTTGGCTCAA CTGATTGTTG AACGCACGAT GAAGATCATC
GTTCACAACA TCAATGTAAT GAACGCTCAA GGTGTGATCT TAGGCTCTGG CGAGAGCCAT
AGAATAGGCT CAACTCATGA GGGAGCACTA CTCGCCATTA GCCAAAACAG AACAGTCGAG
ATCAATGCGG CCAGTGCAGA TACTCTCCAT GGCGTTAAAG CAGGCATTAA CTTACCTTTA
CATTATCAGG GTGAGATTAT TGGTGTTATT GGTATTACCG GCGATCCCGA GCGCTTAAAC
AGCTATGGAG AGCTGCTTAA GATGACAGCA GAGTTGATTG TGGAGCAAGC AAACTCTCTT
GAGCTAGCTC AATGGCAGTA TCGCCAAAAA GAGGAGTTTA TTCTTCAGCT AATTAACTCC
ACGCAGGAGT TAACACCACA CCTGATTGAT TGGGCTTCAC AGCTTGATAT TGATATCTAC
GCGCCTCGCG TCGCTGCCAT CATTCAGGTT CAGGGAGATA AAGAGCAGAT CTCTGCCAAC
TCAATTTTAA AAAAGGTGCT AAATCTGCTC GAAAGCCCCT CCCGCGGCAA TCTAGTTGCC
ATGACTTCAA TGACAGAACT GGTTATTTTA AAACCCGCTT TCCTCAATGG TAAACAGTGG
GATCCTCAGC TAGAAAGTCA ACGTATCGAT CAGCTTCTCT CCCGTTTACC TCTAAAGATG
AACGCCAGAT TAAAAGTATC TCTTGGCCAC TTCTTCATTA AACCAGCCGA TATCTCACGC
TCTTACCAAA CCGCAAAAGA GACCTTAGCC TTGGGTATGC AGTTGTCACC AGATCAAAAC
AAATATCTCT ATGATGATTA CTCCCTGCGT GTTCTGCTCT CAACCCTCAA AAACGATTGG
CGCGGTGAGG AGTTAATCAC CCCGTTTCAG ACATTAATAG ATGCAGATAA AAAGGGCCAA
CTCAATAAAA CTTTAACAGC CTATCTTACC CATTTTGGTG ATCAGCAAAA ATGTGCCAAT
GCACTGTTTA TTCACAGAAA CACATTAAGA TACCGCTTAG ATAAGATCCA ACAGATCACA
GGAGTTGATA TTCAGCAGCT CGATGGGCTA CTCCAGCTCT ATCTCGGACA AATATTGACG
AGCCAATAG
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| Protein sequence | MYFLDSTLAQ LIVERTMKII VHNINVMNAQ GVILGSGESH RIGSTHEGAL LAISQNRTVE
INAASADTLH GVKAGINLPL HYQGEIIGVI GITGDPERLN SYGELLKMTA ELIVEQANSL
ELAQWQYRQK EEFILQLINS TQELTPHLID WASQLDIDIY APRVAAIIQV QGDKEQISAN
SILKKVLNLL ESPSRGNLVA MTSMTELVIL KPAFLNGKQW DPQLESQRID QLLSRLPLKM
NARLKVSLGH FFIKPADISR SYQTAKETLA LGMQLSPDQN KYLYDDYSLR VLLSTLKNDW
RGEELITPFQ TLIDADKKGQ LNKTLTAYLT HFGDQQKCAN ALFIHRNTLR YRLDKIQQIT
GVDIQQLDGL LQLYLGQILT SQ
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