| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3129 |
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| Symbol | |
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| ID | 6117448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3836566 |
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| End bp | 3838065 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634674 |
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| Product | peptidase M4 thermolysin |
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| Protein accession | YP_001761495 |
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| Protein GI | 170727469 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3227] Zinc metalloprotease (elastase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00147708 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATAC CTAGGTTAGT TCCAACTTTA GTCGCAGTGT GTGTGACAAG TTCGTTTCAT
CTACAAGCAG CTGAGTTTAA ATTTAATAAA AATCAATCAA TTAATCATGC TGCAGGAGTA
AGTCAACTCA ATCACTTTGA AAAGAGCCTC TCAGTTAAAA CCGCAAAGGG GACTCAAAAA
AGTAAACAAA AACAGATGTT CAATGGCGTG CCTGTTTATG GCCACCATCT AGTGGTTGAA
ACTGATGGCG AGTCAAATAT AGCTTCTGGT CGTTTGGCGC AAATTGATGA TGAGTTCTCT
GTTCAAGCTG GGATCACTCG AGGTCAGGCG ATTGCTTCAC TCAATAAGCT ATATCAAGGC
TCTGCCGCTT CGGGTCAAAA AGAGGTTGAG CTGGTGGTCT TGATGCAGGA TAAGGCTCCC
CGTTTAGCTT ATCGCGTGTC ATATCTGAGT GATAAAGGCG ACACTATTTC CCGTCCTGCG
GGCTTAGTTG ATGCCAACAG TGGTGAGGTT ATTCGTCATT GGAATGAGCT AATGACGGCT
AAAAATGGTA AAGGTAAACC TGGTGGCGGT ACTGGTGGTG GCACACCTGT TCCCTATGAT
GCCAGTGGAC CAGGAGGAAA TGCTAAAGTT GGTCGATACT ATTATGGCAG TGACTTTGGT
CCCTTAGCGG TACAGGAGTC TGGTGGCACC TGCTCCATGG TGAACGACAA TGTTAAAACC
ATTAACATGA AGAGCAAGAC TCGTGGAGGA AATACATTCA CCTTTACCTG TCCTGAAAAC
ACCTATAAGA CAACCAATGA TGCATATTCC CCACTAAATG ATGCTCATTA CTTTGGTAAT
GTTATCTTTA ATATGTACCA AGATTGGTAT CAAACTGCTC CTCTCACCTT TCAGTTAGAG
ATGCGTGTGC ACTATGGCCG TAGATATGAA AATGCCTTTT GGGATGGAAG AGCGATGTCT
TTCGGTGATG GCGATAGTTA TTTTTATCCT TTGGTGAGCT TAGATGTATC TGCTCATGAG
GTGAGCCATG GGTTTACAGA GCAAAACTCA GGTCTTGAGT ACAGTGGTCA GTCAGGCGGA
ATTAATGAGT CTTTTTCCGA TATGGCTGGT GAAGCTGCTG AGTTCTACAT GCGCGGTAGT
AACGACTGGA AGGTGGGGTA TGACATAGTT AAAGGCAGTG GTGCACTGCG TTATATGGAT
GATCCTACCC AAGACGGTAA CTCAATCGGT GACGCATCTT ACTACACTGA CGGTATGGAC
GTTCACTACT CTTCAGGTGT ATTTAACCGA GCATTTTACC TTTTGTCTAA TAAGACTGGA
TGGGATACCC ATAAATCTTT TGATGTATTT GTACTAGCCA ACCAACTCTA TTGGTCTGCG
ACAAGTGATT TTAAAGATGC TGCATGCGGT GCTGAGAATG CCGCAAGGGA TCTTGGCTAC
CCAGTGGCGG ATGTGACAGA TGCGTTTGCT TATGTAAGCA CCTCGTGCAT AAGTTTTTAA
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| Protein sequence | MKIPRLVPTL VAVCVTSSFH LQAAEFKFNK NQSINHAAGV SQLNHFEKSL SVKTAKGTQK
SKQKQMFNGV PVYGHHLVVE TDGESNIASG RLAQIDDEFS VQAGITRGQA IASLNKLYQG
SAASGQKEVE LVVLMQDKAP RLAYRVSYLS DKGDTISRPA GLVDANSGEV IRHWNELMTA
KNGKGKPGGG TGGGTPVPYD ASGPGGNAKV GRYYYGSDFG PLAVQESGGT CSMVNDNVKT
INMKSKTRGG NTFTFTCPEN TYKTTNDAYS PLNDAHYFGN VIFNMYQDWY QTAPLTFQLE
MRVHYGRRYE NAFWDGRAMS FGDGDSYFYP LVSLDVSAHE VSHGFTEQNS GLEYSGQSGG
INESFSDMAG EAAEFYMRGS NDWKVGYDIV KGSGALRYMD DPTQDGNSIG DASYYTDGMD
VHYSSGVFNR AFYLLSNKTG WDTHKSFDVF VLANQLYWSA TSDFKDAACG AENAARDLGY
PVADVTDAFA YVSTSCISF
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