| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3125 |
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| Symbol | |
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| ID | 6117444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3830547 |
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| End bp | 3832550 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634670 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_001761491 |
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| Protein GI | 170727465 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00001045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000606277 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAACG TACAAAATAA TAAATTTGCG CTGCTTCTCG CAGCAAGCGC CGTATCAATG
GCCTTAACCG GTTGTGGCGG CAGTGATGGC AATGATGGCG ACAGCGGTAA GCCAGGTGGT
CCAGCAGCTG AAGTGGTTAA TGTTTTAAAC CTTGATGTCA CAAAAGTGAC CTACCAAGAT
GGCAATCCAT CAATCACGGT TTTCGCAACC AATGAAGAAG ATTTACCTGT CGTTGGGTTA
ACAGCGCTAG AAGTTAAAGC GGTTGCTCAG CTTCTTCCTC AAGGCGCTAC TGGAGCTGGC
GATAGTGCTC AATGGCAAAA AACAGGGTCT GAGAAGGTCT TTGTCGATCA CAAGAATGGT
AACTACACTT TCGATATAGC CTTAGAGGGT TACAACCCAG AGCTAACACA AAGATACAAT
GTCATAGCCA GTGCATCGAC ACTGCAAGAT GGCATCACCA CAGTGCCTCG CACAGAGCTC
TCTGAAGATT TCTCAGGTGA CGGTTACCAA GCGCTGTATA CCAAAGATAT CGTCTCTACC
CAAACCTGTA ATACTTGTCA TGCCCAGGGA GAGAAGATCT ACCACGGCTA CACATCAGCA
GAGACTTGTG CCTCTTGCCA CACCCAAGAG TGGGCAGAAG GTCGCGGTAA GCCTGAAGTC
GCTTTCACAC ATATGGTTCA TAACGTCCAT AACTCAGCGA AAGGCTACAA GGCTGACAGA
ACCACAGGCG AATTCACTAA AGACGCTAAA AAAGCCCACG CCCTGTTACA AGACAACTGT
AAAACGTGTC ACGTAGCGCC AGCAGAAGAC AGCGATGAGT TAAGTGAATG GGGTAACTGG
TCACGAGTTC CAACCATGGA AACCTGTACT AGCTGCCACG TCAATATCGA CTTTAAAGCT
GGCAAAGGTC ACTCTCAACA AGATGACAAC TCAAACTGTA TCGCTTGTCA CAACGCAAGT
TGGACTGAAG AGCTACACAC TGACGGTTTT GCACAGAAAA AAGCCTTTGT TGGCCAATAT
GGTATGGACG CATCACTAAG TGCTGTGGCG ACCGATACCG GCAGTGACAC CACCTTAAGT
GTCACTATCA CCAATGCTGA AGGCATCGCT CTCGATGCAA GCGCACTAGT TGCCAACATC
CAGCAGCTTG AAACCATCAC TAACGTTGGC CCTAACTTCC CAATTATGGG TTATAACCCA
AATCCAGCTG GGTTAAAGAA AGTGGCTATC GATTTCGTTA AGGCTGGTAT TTTAGACGCC
AATGTTGAGA TTGTGGATGG CAAATTTGTC ACCGTTATCA AAAATCTTCC ATACGGTACA
GGTGATACTG ACACCGCCTT TAGCTTTGTT GGTTTGGCAC TGTGTAATGA CGGTACTGAC
TTAGTTGCTT GTGGTGAAGG CGTTGAAAGT ACAGGCATGA AGGCTGAACT TGCTCACGGC
ACGCTATCTG GTGAAGCGCC AAGCGTTCGT CATACAGACA CGGTTGAGTT TACTGCATGT
GAAAGCTGTC ATGGTACAGA GTGGGGAATT CATCAAGGTT CTCGTCACCC AGGTTTTGTG
ATGACAGAGC AACTTGGTCG CGTCAATGAA GCTGGTGAGA TGATTGTGGG TATTGACGGC
TGTGCAAGCT GCCACACTCC TGATGGTACT TATGCTTCTG GTGCAAACTT AGGCTCAATT
GAGATGAAAC TGCATAAGAC CCATAGTCAA GGCGACTACG GGGCCATTCC TGGTATGAAC
TGTAGCCAGT GTCACTCAGA CTTTAAGCAA GAAGCCTTCG CTAAAAAAGG TGCGCTTGCA
ACCGATGGCG GCTACACAAC CCCAATCGCA GCCACGTGTT ATTCATGTCA CAGCTACAGC
GGTGACAAGT TTAAGAATCA CGTTGAGAGT CAAGGTGCTA AAGTCAATGC TGACTACACT
GTCGCTAATG AAGCAGCCCA GTTAGAAACC TGCTTTATGT GCCACAACCC AAGCATCAAT
GATCACACTT CGGTGAAGAT GTAA
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| Protein sequence | MMNVQNNKFA LLLAASAVSM ALTGCGGSDG NDGDSGKPGG PAAEVVNVLN LDVTKVTYQD
GNPSITVFAT NEEDLPVVGL TALEVKAVAQ LLPQGATGAG DSAQWQKTGS EKVFVDHKNG
NYTFDIALEG YNPELTQRYN VIASASTLQD GITTVPRTEL SEDFSGDGYQ ALYTKDIVST
QTCNTCHAQG EKIYHGYTSA ETCASCHTQE WAEGRGKPEV AFTHMVHNVH NSAKGYKADR
TTGEFTKDAK KAHALLQDNC KTCHVAPAED SDELSEWGNW SRVPTMETCT SCHVNIDFKA
GKGHSQQDDN SNCIACHNAS WTEELHTDGF AQKKAFVGQY GMDASLSAVA TDTGSDTTLS
VTITNAEGIA LDASALVANI QQLETITNVG PNFPIMGYNP NPAGLKKVAI DFVKAGILDA
NVEIVDGKFV TVIKNLPYGT GDTDTAFSFV GLALCNDGTD LVACGEGVES TGMKAELAHG
TLSGEAPSVR HTDTVEFTAC ESCHGTEWGI HQGSRHPGFV MTEQLGRVNE AGEMIVGIDG
CASCHTPDGT YASGANLGSI EMKLHKTHSQ GDYGAIPGMN CSQCHSDFKQ EAFAKKGALA
TDGGYTTPIA ATCYSCHSYS GDKFKNHVES QGAKVNADYT VANEAAQLET CFMCHNPSIN
DHTSVKM
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