| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3074 |
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| Symbol | |
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| ID | 6117389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3765652 |
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| End bp | 3766911 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641634616 |
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| Product | tetratricopeptide domain-containing protein |
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| Protein accession | YP_001761440 |
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| Protein GI | 170727414 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000446325 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000106629 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAAAG TCAGTTTAAA AACGACAAGC ATTGCGGCAG CTTTATTACT CTCTGTTGGT
GGTAGTTTAT CAATAGTGCC TTCAGTAAGC GCTGCGGAAA AATGTCCTAT TGACCTTAGA
AAGTCAAAAG CGGTAGGTCA AAGTGCAGCT AAAAAGGTTG GGAAGTCATT TGCTGCTTAC
CAAGAGGGGA ATGTCGATGA AGCTATCGCC ATTTTGCTTG AAGTTAATGC TAAGAATGAC
TTTGATAAGG CCTATATCGA CCGTATGTTG GGTAACTTTT ATGCTGAAAA ATCTCAAATG
GGAACAGCAA TTAAGTATCT TAAAAAAGCG GTTGAAGCTG ATATCTTAGG TGGTGTTGAT
CATGCTGCGA CGGTTAGGCT CTATGCTGAT CTTCTGATCC AGGAGAAGAA GTTTAAAGAG
TCTATTCCTC AATACTACAA GTGGATGGAG TTTACCTGTA AACAGGATGC TCAAGTCTAC
CGCCGTATCG GTATTGCTTA CTCTGAGCAG AAGAACTGGA AAAAAGTACT AGAGGTCGCC
GATAAGGGAC TTTCTATCTC TGATAAACCT GATAAAGGTC TCTATCAGAT GAAGCTAACG
GCTTACTTTA ACCAGAAAAA CTACCCTGCT GCAGTGAAAG TGCTTGAGAC TATGGTGCCG
CTTTTCCAAG ACGATAAACG TCTTTGGGTT CAGCTAGCTC AGTTTTATTT GATGACTGAG
GACTACACCA AATCACTTGC GACCTATGAT CTGGCTTATA TGAATGGCTT TTTGGAGACG
GCGGGTAACA TCACTCGTTT GACTCAGCTT CTTGCACAAA AAGGTTCTTC ATACCGAGCT
GCTCAGATAT TTGAGAAACA CTTAAAGTCT GGATTGATCA AAGAGGATGA GAAGACACTT
TCAATCCTTG CTGGTTTTTA TCACAATGCT AAAGAGTTAA AAGAGGGCGC TTATTACTAT
GGTAAAGCAG CTGCTGTTAA TAACAGCGGG AAGTTTTACT TAAAGCAAGC GCGTTTACTA
ACTCTTGAAG AGAAGTATAA GTCAGCGATT CCAGTGCTTA AAAAGGCACT TGATGCCGGT
GGTGTTAATG CTGGTGAAGT TCAATTTGAA CTAGCACTCG CATATCTTGG TACTAAGCAG
TACAAGGCAG CTTATCAGCG TTGTAAGCTT GCGGCTAAAG ATAAGAAAAC CGCTCGCACA
GCTAAGAGTT ACTTAGCCTA TATCGAAGAG AAGGCTCGTA TTTACAAAGT ACAATTATAG
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| Protein sequence | MAKVSLKTTS IAAALLLSVG GSLSIVPSVS AAEKCPIDLR KSKAVGQSAA KKVGKSFAAY
QEGNVDEAIA ILLEVNAKND FDKAYIDRML GNFYAEKSQM GTAIKYLKKA VEADILGGVD
HAATVRLYAD LLIQEKKFKE SIPQYYKWME FTCKQDAQVY RRIGIAYSEQ KNWKKVLEVA
DKGLSISDKP DKGLYQMKLT AYFNQKNYPA AVKVLETMVP LFQDDKRLWV QLAQFYLMTE
DYTKSLATYD LAYMNGFLET AGNITRLTQL LAQKGSSYRA AQIFEKHLKS GLIKEDEKTL
SILAGFYHNA KELKEGAYYY GKAAAVNNSG KFYLKQARLL TLEEKYKSAI PVLKKALDAG
GVNAGEVQFE LALAYLGTKQ YKAAYQRCKL AAKDKKTART AKSYLAYIEE KARIYKVQL
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