| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3061 |
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| Symbol | |
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| ID | 6117376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3751192 |
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| End bp | 3752337 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634603 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001761427 |
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| Protein GI | 170727401 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.749747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0113326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTA TCCATACATC CGATTGGCAT ATTGGCCGTC AACTTCACAA CCAAAGTTTG
CTTGAAGATC AGCGTCATGT ACTGGCACAA ATTGTCGAGT TGGCAGTGAC TCATGAGGTC
GATGGAGTGA TCATCGCCGG AGATATCTAT GACCGCTCAA TTCCGCCTGC CAATGCGGTT
GCCTTGCTCG ATGAGGTGGT GAACCGTTTA GTCAATGAGT TGAAGATCCC TGTGATCATG
ATAGCGGGCA ACCATGATGG TCATGAGCGT TTAGGTTTTG CTTCTAGGCA GATGAGAGAG
AGCGGTTTAC ATATTATCGG GCCGCTTAAG CCCACACTGA CTCCAATCGT ACTGAAAGGA
GATACCGGTG ATGCGGTGTT TTATGGTCTG CCCTATGCCG ATCCGGCGAC GGTACGTCAT
CTGTTTGAGT CTGAGGTAAG CACCCATGAG CAGGCGATGG TTGAACTACT TGAACAGGTC
CATAAGCACG ATAGTCAAGG ACTACCTAAA GTGGTGATCA GCCACTGTTT CCTTGATGGC
GGTAGTGAGT CTGAATCTGA GCGCCCTTTG AGTATTGGCG GCGCGGATAA AATATCACCT
TCACTGTTTA CACCATTTAG TTACACGGCG CTGGGTCATC TTCATGGCCC TCAATTTAAA
GGGGAGCCGC AGGTTCGTTA CTCGGGCTCT ATTTTAAAAT ACTCTTTCAG TGAGCAACAC
CAGAAGAAGT CGGTGACCTT AGTTGAGCTG ACAGCTGAAG GGGAGGCGAG CATTGAACTG
TTACCGTTAA CGGCGATGCG TGATGTGCGC ATTATCGAAG GTGAACTCGA TACCTTATTA
GAGGCTGGTA AAGCGGATCT TCACCGTGAT GATTACCTGA TGGTTAGATT ACTCGATAAG
CGGGCGATTT TAGATCCCAT GGGCAAACTC AGAGAGGTAT ACCCTAATGT GTTGCATCTT
GAACGTACTG GCTTAATGGC CAATAACAGC CAACTTGCTA TTGGACGGGA TCAGATCAAA
AAGGGAGAGC TCGACATGTT TACTGACTTC TTCTCTCAAG TGTCTGGTGA ACCTATGAGT
GAAGCGCAAC AAACTGTGAT GGTTGATACT ATCGATGAGC TACATAAGCA GGAGCGCACA
TCATGA
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| Protein sequence | MKFIHTSDWH IGRQLHNQSL LEDQRHVLAQ IVELAVTHEV DGVIIAGDIY DRSIPPANAV
ALLDEVVNRL VNELKIPVIM IAGNHDGHER LGFASRQMRE SGLHIIGPLK PTLTPIVLKG
DTGDAVFYGL PYADPATVRH LFESEVSTHE QAMVELLEQV HKHDSQGLPK VVISHCFLDG
GSESESERPL SIGGADKISP SLFTPFSYTA LGHLHGPQFK GEPQVRYSGS ILKYSFSEQH
QKKSVTLVEL TAEGEASIEL LPLTAMRDVR IIEGELDTLL EAGKADLHRD DYLMVRLLDK
RAILDPMGKL REVYPNVLHL ERTGLMANNS QLAIGRDQIK KGELDMFTDF FSQVSGEPMS
EAQQTVMVDT IDELHKQERT S
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