| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3058 |
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| Symbol | |
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| ID | 6117373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3743658 |
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| End bp | 3746231 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634600 |
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| Product | Beta-glucosidase |
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| Protein accession | YP_001761424 |
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| Protein GI | 170727398 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.44664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0198614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCA AACGGCTATT TGTATGTATA TCTATGTTGC TGATGACAGC TGTAGGCTGT
CATCAGCAAC AACAAGCGTT AAACTTAGCT TTAACCCCCG CCACGCCATT GTCGGCTCAT
AAACAGCAAC GTTTAGCCAA TGTCGAGCAG AATGTCGAAA GCCTATTGGC TCAAATGACA
CTCGATGAAA AGATCTCTTT AACTCACGCT AATGCTAAAT TTTCTATCGC TGCCATTGAA
CGATTAGGTA TCCATGAAAT GTGGATGTCT GATGGCCCTC ATGGGGTTCG CCATGAAATC
GAGCGCTACA GCTGGAACTC GGCCAATTGG CAAGACGATC AGTCGACTTA TCTGCCGCCA
TTGACAGCAG TGGCGGCCAG CTGGAACCGA GAAATGGCAG CGCTGCATGG CAATGTACTG
GGAAGCGAAG CGCGACAACG TAACAAAGAT GTCATTTTAG GCCCCGGTGT TAACCTGGCG
AGATTGCCAC TTTATGGGCG TAATTTTGAA TATTTAGGCG AAGACCCGTT TTTGGCTGCT
AAGTTAGTGG TTCCCGCAGT TAAAGCTATC CAATCAAATG ACGTTGCGGC ATCGGTGAAA
CACTATGCGC TAAATACTCA AGAGCTGAAT CGTATTGGTG TAGATGCGAA ACCTGATGAG
CGCACATTAA GAGAAGTATA TTTGCCCGCA TTTGAAGCTG CGGTGAAACA AGGCAACACC
CATACCATCA TGGGCGCATA TAACCGCTAT TACGGCACGA ATGCTAACCA AAGCAAGCAT
TTGGTGATGG ATATTCTCAA AGGTGAGTGG GGCTATAAAG GGGTGCTATT GACAGATTGG
AATGTCGATA TCAATACCTA TGATGCAGCG ATGAACGGCC TTGATATCGA AATGGGTACG
GCGGTTGATA GCTTTGATGA CTACTTTTTA GCGCAACCAT TAAAGCTGAT GATAGAGTCT
GGCAAGGTTC CTATGGCCGT GCTCGACGAC AAAGTCAGGC GTATTTTACG GGTGCAGTTA
TCAATAGGCA TGATGGATAA ACATCGTTTG TCAGGTCAAC GTAATACGAC TGAACATCAT
CAGGCCGCCA GAAAAATCAT TAGTGAAGGG ATTGTGCTGC TAAAAAATGA ACAGAAGGTG
CTGCCATTGG AGGCAAGCAA GCTTAAAAAT GTATTAGTAC TTGGCCCTAA TGCAGAGGTT
TTACATAGTC AAGGCGGGGG ATCGTCTGAA GTTAAGCCAT TATATGAAAT TTCACCACTG
CAAGGTTTGC AAAACAAACT CGGTGCTGAC GTCAATATTA CCGTGATGCG GGCTCAAAAT
AGTGCTGGCG TTGCCCCCAT TGCGACAGAT TACATGGCGA CACGCCATTG GACCGGCACA
CCACAATGGG AGTTGATACG ATATAAAGAT GATGGTTTTG CCAATATTGA ACGCCAGGAT
GATTGGATCG CCAATTCTAG CTACAAATCC AGTAACGCTA GTGCGCCTGA GTTTGTGCGT
ATGAGTACTG ACATAAAGCC GCTTGAATCA GGCGAGCATA TATTGAAGTT AGCACTCAAG
GGGCAAGCCA GCTTACGGAT TAATGGTAAG CAAGTGATGA GCGAGCAAGT GGGCAAAGAG
CAAGTATTCG AGCAGGCAAT CGAGTTAGAT AATAACCAAA CCTATCAGTT CGAGTTGCAA
TATGCCGGTA TGGGTCATGT GACCTTAGGT TGGGACGCAC CAGGCGCACT GTTTACTCCT
GAAGCTGAGT ACCTTGCAGC AGCTAAAGAC GCAGATGCTG TTATCTATTT TGGTGGCTTA
TCACACGCCG ATGACCGAGA AGCCATTGAT CGGATTGATA TGAAGTTGCC AAATGGTCAA
GATGCGGTCA TCAGCAAATT GTTGCAAGCT AACCCTAATA CTGTGGTCTT TTTGAATGGT
GGCTCGGCGG TTGAGATGCC ATGGGTTGAT GAGGCTCAGG CCATTGTTTG GGGCTGGTAT
GGTGGTATGG AGGCCGGCAA CGCTTACGCC GATGTACTGT TTGGCGACGT AAACCCAAGC
GGTAAAATGC CCATCACCTT ACCACGGACG TTGCAAGATA CCGCCCCCAT AAAGCTAGAT
GATTACAATG CAGTGGAGTC GCTGTATAAA GAGGGGGTAT TTATTGGTTA CCGTTGGTTT
GAGCAGCAAA AAATAACGCC TTTGTTTCCA TTTGGCCACG GCTTGTCCTA CACCCAGTTT
CAATATAGTG ACATCAAGCT GTCAGCTAAC CGCTTAAAAG GCGACGAAAG TTTAATCGTG
ACGGCTAAAA TTACAAATAC AGGTGATAGT GCTGGTAGTG AAGTGGTTCA ATTGTATCTG
CAAGATATTG AATCTAGCGT ACCGCGACCG GCAAAAGAGC TAAAAGGTTT TAGTAAAATT
CATCTGCAGC CGGGAGAAAC CGGTATGGTT ACCATGACGC TAAACCAACG TGATTTGTCT
TTCTGGGATG TAAATAGCGC TGATTGGCTA GCTGAGCCGG GTGAGTTTAA GGTGATGATA
GGAGCTTCTG TCGCCGATAT TCGCTTGGAC AAACAGTTTA ACTATCGTAA TTGA
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| Protein sequence | MKRKRLFVCI SMLLMTAVGC HQQQQALNLA LTPATPLSAH KQQRLANVEQ NVESLLAQMT
LDEKISLTHA NAKFSIAAIE RLGIHEMWMS DGPHGVRHEI ERYSWNSANW QDDQSTYLPP
LTAVAASWNR EMAALHGNVL GSEARQRNKD VILGPGVNLA RLPLYGRNFE YLGEDPFLAA
KLVVPAVKAI QSNDVAASVK HYALNTQELN RIGVDAKPDE RTLREVYLPA FEAAVKQGNT
HTIMGAYNRY YGTNANQSKH LVMDILKGEW GYKGVLLTDW NVDINTYDAA MNGLDIEMGT
AVDSFDDYFL AQPLKLMIES GKVPMAVLDD KVRRILRVQL SIGMMDKHRL SGQRNTTEHH
QAARKIISEG IVLLKNEQKV LPLEASKLKN VLVLGPNAEV LHSQGGGSSE VKPLYEISPL
QGLQNKLGAD VNITVMRAQN SAGVAPIATD YMATRHWTGT PQWELIRYKD DGFANIERQD
DWIANSSYKS SNASAPEFVR MSTDIKPLES GEHILKLALK GQASLRINGK QVMSEQVGKE
QVFEQAIELD NNQTYQFELQ YAGMGHVTLG WDAPGALFTP EAEYLAAAKD ADAVIYFGGL
SHADDREAID RIDMKLPNGQ DAVISKLLQA NPNTVVFLNG GSAVEMPWVD EAQAIVWGWY
GGMEAGNAYA DVLFGDVNPS GKMPITLPRT LQDTAPIKLD DYNAVESLYK EGVFIGYRWF
EQQKITPLFP FGHGLSYTQF QYSDIKLSAN RLKGDESLIV TAKITNTGDS AGSEVVQLYL
QDIESSVPRP AKELKGFSKI HLQPGETGMV TMTLNQRDLS FWDVNSADWL AEPGEFKVMI
GASVADIRLD KQFNYRN
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