Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3058 |
Symbol | |
ID | 6117373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3743658 |
End bp | 3746231 |
Gene Length | 2574 bp |
Protein Length | 857 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641634600 |
Product | Beta-glucosidase |
Protein accession | YP_001761424 |
Protein GI | 170727398 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.44664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0198614 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCA AACGGCTATT TGTATGTATA TCTATGTTGC TGATGACAGC TGTAGGCTGT CATCAGCAAC AACAAGCGTT AAACTTAGCT TTAACCCCCG CCACGCCATT GTCGGCTCAT AAACAGCAAC GTTTAGCCAA TGTCGAGCAG AATGTCGAAA GCCTATTGGC TCAAATGACA CTCGATGAAA AGATCTCTTT AACTCACGCT AATGCTAAAT TTTCTATCGC TGCCATTGAA CGATTAGGTA TCCATGAAAT GTGGATGTCT GATGGCCCTC ATGGGGTTCG CCATGAAATC GAGCGCTACA GCTGGAACTC GGCCAATTGG CAAGACGATC AGTCGACTTA TCTGCCGCCA TTGACAGCAG TGGCGGCCAG CTGGAACCGA GAAATGGCAG CGCTGCATGG CAATGTACTG GGAAGCGAAG CGCGACAACG TAACAAAGAT GTCATTTTAG GCCCCGGTGT TAACCTGGCG AGATTGCCAC TTTATGGGCG TAATTTTGAA TATTTAGGCG AAGACCCGTT TTTGGCTGCT AAGTTAGTGG TTCCCGCAGT TAAAGCTATC CAATCAAATG ACGTTGCGGC ATCGGTGAAA CACTATGCGC TAAATACTCA AGAGCTGAAT CGTATTGGTG TAGATGCGAA ACCTGATGAG CGCACATTAA GAGAAGTATA TTTGCCCGCA TTTGAAGCTG CGGTGAAACA AGGCAACACC CATACCATCA TGGGCGCATA TAACCGCTAT TACGGCACGA ATGCTAACCA AAGCAAGCAT TTGGTGATGG ATATTCTCAA AGGTGAGTGG GGCTATAAAG GGGTGCTATT GACAGATTGG AATGTCGATA TCAATACCTA TGATGCAGCG ATGAACGGCC TTGATATCGA AATGGGTACG GCGGTTGATA GCTTTGATGA CTACTTTTTA GCGCAACCAT TAAAGCTGAT GATAGAGTCT GGCAAGGTTC CTATGGCCGT GCTCGACGAC AAAGTCAGGC GTATTTTACG GGTGCAGTTA TCAATAGGCA TGATGGATAA ACATCGTTTG TCAGGTCAAC GTAATACGAC TGAACATCAT CAGGCCGCCA GAAAAATCAT TAGTGAAGGG ATTGTGCTGC TAAAAAATGA ACAGAAGGTG CTGCCATTGG AGGCAAGCAA GCTTAAAAAT GTATTAGTAC TTGGCCCTAA TGCAGAGGTT TTACATAGTC AAGGCGGGGG ATCGTCTGAA GTTAAGCCAT TATATGAAAT TTCACCACTG CAAGGTTTGC AAAACAAACT CGGTGCTGAC GTCAATATTA CCGTGATGCG GGCTCAAAAT AGTGCTGGCG TTGCCCCCAT TGCGACAGAT TACATGGCGA CACGCCATTG GACCGGCACA CCACAATGGG AGTTGATACG ATATAAAGAT GATGGTTTTG CCAATATTGA ACGCCAGGAT GATTGGATCG CCAATTCTAG CTACAAATCC AGTAACGCTA GTGCGCCTGA GTTTGTGCGT ATGAGTACTG ACATAAAGCC GCTTGAATCA GGCGAGCATA TATTGAAGTT AGCACTCAAG GGGCAAGCCA GCTTACGGAT TAATGGTAAG CAAGTGATGA GCGAGCAAGT GGGCAAAGAG CAAGTATTCG AGCAGGCAAT CGAGTTAGAT AATAACCAAA CCTATCAGTT CGAGTTGCAA TATGCCGGTA TGGGTCATGT GACCTTAGGT TGGGACGCAC CAGGCGCACT GTTTACTCCT GAAGCTGAGT ACCTTGCAGC AGCTAAAGAC GCAGATGCTG TTATCTATTT TGGTGGCTTA TCACACGCCG ATGACCGAGA AGCCATTGAT CGGATTGATA TGAAGTTGCC AAATGGTCAA GATGCGGTCA TCAGCAAATT GTTGCAAGCT AACCCTAATA CTGTGGTCTT TTTGAATGGT GGCTCGGCGG TTGAGATGCC ATGGGTTGAT GAGGCTCAGG CCATTGTTTG GGGCTGGTAT GGTGGTATGG AGGCCGGCAA CGCTTACGCC GATGTACTGT TTGGCGACGT AAACCCAAGC GGTAAAATGC CCATCACCTT ACCACGGACG TTGCAAGATA CCGCCCCCAT AAAGCTAGAT GATTACAATG CAGTGGAGTC GCTGTATAAA GAGGGGGTAT TTATTGGTTA CCGTTGGTTT GAGCAGCAAA AAATAACGCC TTTGTTTCCA TTTGGCCACG GCTTGTCCTA CACCCAGTTT CAATATAGTG ACATCAAGCT GTCAGCTAAC CGCTTAAAAG GCGACGAAAG TTTAATCGTG ACGGCTAAAA TTACAAATAC AGGTGATAGT GCTGGTAGTG AAGTGGTTCA ATTGTATCTG CAAGATATTG AATCTAGCGT ACCGCGACCG GCAAAAGAGC TAAAAGGTTT TAGTAAAATT CATCTGCAGC CGGGAGAAAC CGGTATGGTT ACCATGACGC TAAACCAACG TGATTTGTCT TTCTGGGATG TAAATAGCGC TGATTGGCTA GCTGAGCCGG GTGAGTTTAA GGTGATGATA GGAGCTTCTG TCGCCGATAT TCGCTTGGAC AAACAGTTTA ACTATCGTAA TTGA
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Protein sequence | MKRKRLFVCI SMLLMTAVGC HQQQQALNLA LTPATPLSAH KQQRLANVEQ NVESLLAQMT LDEKISLTHA NAKFSIAAIE RLGIHEMWMS DGPHGVRHEI ERYSWNSANW QDDQSTYLPP LTAVAASWNR EMAALHGNVL GSEARQRNKD VILGPGVNLA RLPLYGRNFE YLGEDPFLAA KLVVPAVKAI QSNDVAASVK HYALNTQELN RIGVDAKPDE RTLREVYLPA FEAAVKQGNT HTIMGAYNRY YGTNANQSKH LVMDILKGEW GYKGVLLTDW NVDINTYDAA MNGLDIEMGT AVDSFDDYFL AQPLKLMIES GKVPMAVLDD KVRRILRVQL SIGMMDKHRL SGQRNTTEHH QAARKIISEG IVLLKNEQKV LPLEASKLKN VLVLGPNAEV LHSQGGGSSE VKPLYEISPL QGLQNKLGAD VNITVMRAQN SAGVAPIATD YMATRHWTGT PQWELIRYKD DGFANIERQD DWIANSSYKS SNASAPEFVR MSTDIKPLES GEHILKLALK GQASLRINGK QVMSEQVGKE QVFEQAIELD NNQTYQFELQ YAGMGHVTLG WDAPGALFTP EAEYLAAAKD ADAVIYFGGL SHADDREAID RIDMKLPNGQ DAVISKLLQA NPNTVVFLNG GSAVEMPWVD EAQAIVWGWY GGMEAGNAYA DVLFGDVNPS GKMPITLPRT LQDTAPIKLD DYNAVESLYK EGVFIGYRWF EQQKITPLFP FGHGLSYTQF QYSDIKLSAN RLKGDESLIV TAKITNTGDS AGSEVVQLYL QDIESSVPRP AKELKGFSKI HLQPGETGMV TMTLNQRDLS FWDVNSADWL AEPGEFKVMI GASVADIRLD KQFNYRN
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