| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3013 |
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| Symbol | |
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| ID | 6117328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3691680 |
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| End bp | 3692213 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634555 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001761379 |
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| Protein GI | 170727353 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0108117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.339909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCGG ACAGTAAATA TCTAGCGCAA ATAGGGCTTG TTAATCCTAA GAGTCCAACG
AATGTTGGTG GTATTATGCG CGCTGCTGGG TGTTATCAGG CTGATGCCGT ACTCTATACC
GGTAAACGAT ATGAGTTGGC AGCTAGAAAT GGTAATGCCC AATACAACAC AGATACCAAA
AGAGCAGGGC AGCATATTCC GCTTCAAGCC GTGGAGAGCT TACTTGCAGC GAAAGTGGAT
GATGTGAAGC TTGTTTGTGT TGATCTTGTG GTTGGTGCGA TTTCACTACC TGAGTTTGTT
CATCCCGACA AAGCCCTATA TGTGTTTGGC CCAGAAGATG GCACCATAGG TCAAGAGATA
ATCGATAAGG CAGACGCTGT GGTTTATGTT CCCACTGTTG GCTGTATGAA CTTGGCGGCA
TCGGTCAATG TTCTTCTCTA TGACAGGCTT GCTAAATTAG GCTGTTTAGA TGCCAATGAT
GAACTGATTA AACGTAGCCG AGATACAAAT AACAGAGTTA AGGTTAAGTC CTGA
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| Protein sequence | MSADSKYLAQ IGLVNPKSPT NVGGIMRAAG CYQADAVLYT GKRYELAARN GNAQYNTDTK
RAGQHIPLQA VESLLAAKVD DVKLVCVDLV VGAISLPEFV HPDKALYVFG PEDGTIGQEI
IDKADAVVYV PTVGCMNLAA SVNVLLYDRL AKLGCLDAND ELIKRSRDTN NRVKVKS
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