| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2998 |
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| Symbol | |
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| ID | 6117313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3674215 |
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| End bp | 3674892 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641634540 |
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| Product | N-acyl-L-homoserine lactone synthetase-like protein |
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| Protein accession | YP_001761364 |
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| Protein GI | 170727338 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.897575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGAAT TGAATCAAAC TGACTCAACA CAATTTAACA AAAGTAATAA CCTCCCCTCT
CAAGTAGATA CATCCTCACA TTACCAAATC ACACACAATC CAACGACTCA ACAGATGGAC
AAGTTGCACC AGTTACGCGC TGAAGTGTTT TGTCGTGAGC TAGCCTGGGT TGGAAGCCCA
GAAGATAAAA GGGAGTATGA TAATTTTGAT AATACAACCA CACATTTAGG CCTCTTTGTT
CGTGGCCAAG CGACAGGATA TTTAAGAATT CATCATCATA ATAGCCCTTG GATGATCAAC
ACTATCTTCA ATCAACTACT GCCAGACGGC GCACCGACAC CTCAAGAAGC TAACGCCTGT
GAAGTGTCTC GATTACTGAT TGAATCCTCT CACAGAGGTA AAACAAAGGT TAATAATTAT
CCACCGATCC ACTTGCTCCT CTCATATTTG CAAAACTACT GCAGCAGCAA AAATATAAGG
TATGTCTACA TGGTAGTGAC ACCAGCCACT AGAGTCGTCT TTGCGAAAAT AGGTTTTAAG
TCAACACCAT TATATCAAGC TGTTAAAATG AAAGATGGCT GTTATGCCAT GGCCGCAATA
TTAGATTTTG ATCAGATAGA TACCTTAATT CCATCGAAAG ACGCACCAAA AATCGAGCCG
TTATTCTTTA CAGGCTAA
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| Protein sequence | MQELNQTDST QFNKSNNLPS QVDTSSHYQI THNPTTQQMD KLHQLRAEVF CRELAWVGSP
EDKREYDNFD NTTTHLGLFV RGQATGYLRI HHHNSPWMIN TIFNQLLPDG APTPQEANAC
EVSRLLIESS HRGKTKVNNY PPIHLLLSYL QNYCSSKNIR YVYMVVTPAT RVVFAKIGFK
STPLYQAVKM KDGCYAMAAI LDFDQIDTLI PSKDAPKIEP LFFTG
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