| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2996 |
|---|
| Symbol | |
|---|
| ID | 6117311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 3671166 |
|---|
| End bp | 3672713 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641634538 |
|---|
| Product | leucyl aminopeptidase |
|---|
| Protein accession | YP_001761362 |
|---|
| Protein GI | 170727336 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0260] Leucyl aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.143119 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAACTA AAAAAACTCT TCTTCCTACT ACCCTAACCG CTTCAATCAG TATTGCACTA
TTTAGTGGTT TTTCAGCACA AGCAGAAACC TTTAAATTTG TGGATCACAA TAAGAGTCAA
GATGCTGAAA CACTCATTGT ATTTCAAGCT GGTGAGCAGC GCTCTCATGA TTTAACCCGA
CTCGATAAAT TATCAAACCA ACAGATTTCA GCCGCCTTAG CACTCGATGG CTTTACAGGT
GAAAAGAGTG AAATTGTTGA GATATTAATG CCCAATGGTA TTGAAGCTAA ACGTCTTGTG
GTGATGGGAT TAGGTAGCAC AGAGAAGATG AGCGCAGGTC AAGTCAACCA CATTGGCGCA
TCAGTAACGG CTCACTTAAG CCAGTATTCA ACAAATAACA TCAAGATTTT AACTGCAGGG
ATTGAGGATT CAAACAGCAA TGCCAGTTTC GCTTCAGAGC TTGCACATGG CATCAACCTA
CGCGCCTATC AATTTGATAA ATATCTATCT AAAAAGAAAC CTGCCGACAA AAACTACACC
ATCACCGTGA CAGATCCCGA TAAAGCAGAA GCGAATTACC AGCAGCTATC TGCCATTGAA
CAAGGCGTAT TTTTAGCCCG AGATCTTACC TCTGAAGTAC CTACAGAGAT GAACCCAGTA
CACTTTGCCA CGGCAGCTAA AGAGCTTAAT AAACTTGGCG TAAAAGTTAC AGTGTTAGAG
CCTAAGAAGA TTAAACAACT TGGAATGGGC GCACTGCACG CCGTCGGCCG AGGTTCACAA
GAGGGTGCCC GCCTCGTGAT AGCTCACTGG CAGGGCAATG ATGACTCACC AATTGCGCTT
GTTGGTAAAG GGATCACCTT TGATTCAGGT GGATACAACA TCAAGGCAAC AGGAGACTCC
ATCTCACGGA TGAAGTCTGA CATGGCCGGT GCTGCTGCGG TTCTTGGCAC AGTTAAAGCC
ATGGCGGTTC AAAAAGCCGA TGTCAATGTA GTCGCCATCA TGGCAATGGC TGCAAACATG
GTGTCTGAAA CGGCTTTTGC CCCAGGAGAT GTGGTGGTGA CAGCCGAAGG GTTAAGCGTT
GAAGTACTTA ATACCGACGC CGAAGGTCGA CTCGTTTTGG CCGATGCCCT CTGGTATGCC
CGTGAATTTT ATCAACCTGA GGTGATGATC GATGTGGCGA CCTTAACTGG TTCAAAAGTT
CGAGCCTTAG GTAAACGTTA TACCGGCTTA TTTAGCGATG ACGATACTCT GGTCAATGAA
CTGACAATGT CAGGACTGGC GGTTGATGAG AAAGTATGGC GCTTGCCTTT AGCCTATGAT
GATCTGCTCA AGAGTCCAAT TGCCGATCTT AAAAATGCTG GCTATGGAGG ACCTGGAGCT
ACAACTGCAG CGGTATTCCT ACAGCAATTT GCAGGTGATA CTAAATGGGC TCATCTAGAT
ATTGCAGGCA GTGCACTGGC CGCAAAAGAT AAAGGTGTAA CACCGGCTGG AGGTACTGGA
CACGGTGTTC GTTTACTTAG CCATTGGATA ATAAGTCAAG AGAAATAA
|
|---|
| Protein sequence | MITKKTLLPT TLTASISIAL FSGFSAQAET FKFVDHNKSQ DAETLIVFQA GEQRSHDLTR
LDKLSNQQIS AALALDGFTG EKSEIVEILM PNGIEAKRLV VMGLGSTEKM SAGQVNHIGA
SVTAHLSQYS TNNIKILTAG IEDSNSNASF ASELAHGINL RAYQFDKYLS KKKPADKNYT
ITVTDPDKAE ANYQQLSAIE QGVFLARDLT SEVPTEMNPV HFATAAKELN KLGVKVTVLE
PKKIKQLGMG ALHAVGRGSQ EGARLVIAHW QGNDDSPIAL VGKGITFDSG GYNIKATGDS
ISRMKSDMAG AAAVLGTVKA MAVQKADVNV VAIMAMAANM VSETAFAPGD VVVTAEGLSV
EVLNTDAEGR LVLADALWYA REFYQPEVMI DVATLTGSKV RALGKRYTGL FSDDDTLVNE
LTMSGLAVDE KVWRLPLAYD DLLKSPIADL KNAGYGGPGA TTAAVFLQQF AGDTKWAHLD
IAGSALAAKD KGVTPAGGTG HGVRLLSHWI ISQEK
|
|---|
| |