| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2975 |
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| Symbol | |
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| ID | 6117290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3641166 |
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| End bp | 3642062 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641634517 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001761341 |
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| Protein GI | 170727315 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAACT TAAACTGGCT GCATACTTTC AAAACCTTAA TTGAGGTGGG GCACTTTACT
CATACAGCTG AAAAGCTATA CATGACTCAG CCAGGAGTGA GTCAACATAT CAAGAAACTC
GAGCAAGCTT GTGGACACTC GCTGATCAAA CGTGAAAAGA AAAGTTTTGA GATCACAGAG
CAGGGGCAAC GAGTCTATGA CTACGCTGTT CAAGTCGCTT TGACTCAAGC CAAGCTTCTC
GATAGCCTGC ATTTTGATGA CCCATATGCA GGCACTTGCA AACTGTCATG CTCAGGAGCA
TTAGCGCTTC AGCTTTACCC TGCATTACTC ACTCTGCAAA TTAACTATCC TGAGTTAGTA
ACGCACCTTG AAGCAGCTCC TAACGATAAG ATACTTAACG ATATTCAAAA TGGTAAAGTC
GATATTGGTC TGGTCACTCA AGCTCCCAGT GCGAATGGAT TTCATGTGGA GAGAATAGGC
ACAGAGCCTC TTTGTTTAAT TTTACCTTTA CGCTATAAAG ATAAGGTGTT GACTGCGGCC
TCACTGCAAG AGTGCGGTTT AGTTAAACAC CCAGATGCTG AACATTATCT ATCACTCTAT
TTCGACCTGT GTGGCAACTC TGAACTCTCA AAACTCAACA TCGATGAAAT AAAAACCGTC
AGCTATGTTA ATCAACTCAA CCAAATTTTG CTGCCGATCT CACTAGGCAT AGGCTGTACT
GTACTCCCTC AAAGTGTGCT TTCGAACTCT AGCTACCGTG ATAAGCTCTA TATTTCCCCC
CCTAAACAAG CTGTAAATGA ATCACTATTT TTGGTGCATA AACGAAACCG ACAGCTAGCA
CGTCGTCACC AAACCATTAA AAACAAAATT CTGGAGCAAC TAAAGGCCAA TGATTAA
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| Protein sequence | MLNLNWLHTF KTLIEVGHFT HTAEKLYMTQ PGVSQHIKKL EQACGHSLIK REKKSFEITE
QGQRVYDYAV QVALTQAKLL DSLHFDDPYA GTCKLSCSGA LALQLYPALL TLQINYPELV
THLEAAPNDK ILNDIQNGKV DIGLVTQAPS ANGFHVERIG TEPLCLILPL RYKDKVLTAA
SLQECGLVKH PDAEHYLSLY FDLCGNSELS KLNIDEIKTV SYVNQLNQIL LPISLGIGCT
VLPQSVLSNS SYRDKLYISP PKQAVNESLF LVHKRNRQLA RRHQTIKNKI LEQLKAND
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