| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2970 |
|---|
| Symbol | |
|---|
| ID | 6117285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3636531 |
|---|
| End bp | 3637340 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641634512 |
|---|
| Product | regulatory protein RecX |
|---|
| Protein accession | YP_001761336 |
|---|
| Protein GI | 170727310 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2137] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.27282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCC CACCACTACG CCAAGCCAAA ACTATCGATA ATGTTTTTAA TAGTGCTTAT
TGGCATCTTA GTCAGCAAGA TTTCACCATC AATGAGATCC GCATCAAGCT TGAACGTAAA
ACAGACAATC AAGAGTGGAT TGAGACTGTA CTCGCTAAGC TAATCGAAAG TGGTTACCTG
AAAAGTAACT TTGATTTTGC CCTGCGCTAC TGTGAGCTTT CCTTTAGTCA TGAACTCGGG
GTAGGGGCCA TAAGGCGTAA GTTAACACTG CGCGGTATTC CGGCAAATGA GGTCGATGCC
GCGATAGAGC AAGTGATGGA CGAGCAAAAT ATTGATGGGT TTGAGATGGC TACATCTCGG
CTTTTAAGCC GCTTTGATAA CTTTCACGGC ACCAACAAGG AGAAAGTTTA TACGCAGATG
ACCTCGAAAG GCTTCTCTCG AGTCGAGATA GACCACGCAT TATCTCAGCA CCCACAGCGT
GAAACTTTGC GCAGTAAATT AGCCATAAAG GCCGATAAAG CTGATCTGGC TGCAGAGATC
ATCAAACTCG CCAATAAAGG TAAAGGTGAA ACACTGATAC TGCAGGAGCT AAAGCAGCGA
CTGATCGATG TGAGTGATTT TGAAGAGACT CTGTATCAAT TAACGCTAGC GGGGGACGTG
GATCTCTATC AGAGCTGCAA AGATGAGCTG GCTAAAAAAC GCTATGATCT GTCGGACTAT
AAAGAGAAAT CCAAAGCTTA TGCTTACCTT TCCCGTAAAG GTTTTGCCAG TGATGAGATT
AAAGAGGCGA TGAAACTAGA TGATGAGTAG
|
|---|
| Protein sequence | MLRPPLRQAK TIDNVFNSAY WHLSQQDFTI NEIRIKLERK TDNQEWIETV LAKLIESGYL
KSNFDFALRY CELSFSHELG VGAIRRKLTL RGIPANEVDA AIEQVMDEQN IDGFEMATSR
LLSRFDNFHG TNKEKVYTQM TSKGFSRVEI DHALSQHPQR ETLRSKLAIK ADKADLAAEI
IKLANKGKGE TLILQELKQR LIDVSDFEET LYQLTLAGDV DLYQSCKDEL AKKRYDLSDY
KEKSKAYAYL SRKGFASDEI KEAMKLDDE
|
|---|
| |