| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2966 |
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| Symbol | |
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| ID | 6117281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3632992 |
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| End bp | 3633912 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641634508 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001761332 |
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| Protein GI | 170727306 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.23829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTTG TAAACGAAAA CATGCAGGGA TTGGTTCTTT TTTCTCATAT AAATAGACAG
GGAAGTTTAA CTGCTGCTGC GCAGTTATTA GGGATGAGCC GCTCTTCAGT CAGCAAACAG
CTAGCAGCGT TAGAGAAAAA AATCGGTTCA AGATTATTTA ATCGAACGAC TCGTAAAATT
GCATTGACCG AGGTGGGTCG TCAAGTGCTT AAAGAGGCAC ATAAAGTAGA GTTGGCACTT
CAAACCATTG AACACATCAG TGAAGATTCT CAATCGATAG TCGCAGGGGA TCTGAATATT
TCATGTGCTA GTGCACAGGG GCGGGTTCAT CTTGTTCCTT TGTTGACCCG ATTTCTTTCG
CTCTATCCTA AAGTTAATGT GAATCTGCAG TTAGAAGATC GATTTATCGA CATGGTAGCG
GAAAACATAG ATGTTTCTAT TCGAGTTGGT TACTTGCCCG ATTCAAGCTT GATCGCTCGT
AAGCTTGGTG ATTTGTCAGG TGTGCTTTGT GCAACTCCTG AATATTTAAC AGGTGCTCCA
GCGTTAAAAA CACCTTCGGA TCTATTACAC CATCGTTGTT TGTTTTATCG AAACAAAAAA
TTGGCAATGA ACTCTTGGAC GTTTTTCAGT GAACAGAGGG GGGAGGAGAC TGTAGTTGTC
TCTGGGCCTT TGAGTATCAA CGATCCAGGT GTGTTGATAT CTGCTGCACT TGAACATGCT
GGAGTATTAC TGACTGATAA AAGCTTACTT GGTGACACTA TGGAGGAGGG AGCCTTGATA
CCCGTATTAC CAGAATATCA ATCCATAGGA AATCTACCTA TATACATTGT TTACCCAAGA
AGAGAGCTTT TACCTGCAAA AACCAAAGCT TTGGTTGATT TTTTATTGAA GGAGATGCCA
AATTTACTGC GAGGTGAATA A
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| Protein sequence | MALVNENMQG LVLFSHINRQ GSLTAAAQLL GMSRSSVSKQ LAALEKKIGS RLFNRTTRKI
ALTEVGRQVL KEAHKVELAL QTIEHISEDS QSIVAGDLNI SCASAQGRVH LVPLLTRFLS
LYPKVNVNLQ LEDRFIDMVA ENIDVSIRVG YLPDSSLIAR KLGDLSGVLC ATPEYLTGAP
ALKTPSDLLH HRCLFYRNKK LAMNSWTFFS EQRGEETVVV SGPLSINDPG VLISAALEHA
GVLLTDKSLL GDTMEEGALI PVLPEYQSIG NLPIYIVYPR RELLPAKTKA LVDFLLKEMP
NLLRGE
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