| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2955 |
|---|
| Symbol | |
|---|
| ID | 6117270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 3621086 |
|---|
| End bp | 3622381 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641634499 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001761323 |
|---|
| Protein GI | 170727297 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTG AACTCTCCCT CGCCGGTTTG TCAGCGCGCA AACACACCTT CACCTTGCCA
CTCAACTATG ATGATCCACA AGGTAAAAAG ATCCAAGTGT TTGCCAGAGA GCTACTCTCA
AATGACATAG ACACAGACTC AAACGAACGC CCCTTTCTCG TCTTCTTTCA AGGAGGTCCA
GGTTTTAGCG CTGTCAGGCC AGCAGATAAC AGTGGCTGGA TAAAGCGTGC CTTAACAGAG
TTCAGAGTAC TACTGTTAGA TCAACGTGGT ACAGGGCTTT CAACCCCTGT CAGCTATTTA
AGTTTGGCTC ACTTTAACTC AGAACTACAA GCCGAGTACT TATCGCATTT TAGAGCCGAT
AACATTATAC GTGATGCAGA AGCCATACGT GAACAGCTCT GTCCAGGGCA AAAATGGAGC
ATTCTCGGTC AAAGCTTCGG CGGATTTTGT GTCCTGAAAT ACCTCAATGA TGCCCCTGAG
GGGGTTAAAG AGGCATATAT CACCGGAGGA ATTCCTTCTC TGACCCGTTC AGCCGATGAG
GTATATCAAG CCACATACCA AAGAGTACTG GCAAAAAATC GCGATTTCTT CACCCGTTTT
AGTGATGCCC AAGAGCTAGT CACTCAGATA GCCGAACACC TCACACACCA TGAAGTACGC
ATCGCGACTG GTGAGCGGCT AACCGTCGAG ATGTTGCAGT TGCTGGGGAT TAATATCGGT
ATGGAGCAAG GTCCAGAGTC TGTTTATTAC CTGCTGGAAC ATGCACTGAT AGAGACAGAT
TTAGGCACCC ATGTAAACCC GTTGTTCCTC GCTCACTTCT GTCATTTATT AGACTTTAAC
ACTAACCCTA TTTTTGCCCT GCTCCATGAG AGCATCTACT GCCAACGCAG TGCATCAAAT
TGGTCAGCGC AGCGAGTTCG CGCTCAATAT GATGAGTTTA ACTACGAGTT TGGCAAACCT
TTCCTCTTCA CTGGAGAGAT GGTCTATCCG TGGTTTTTTG AGCAGTTCAC TAACTTAAAA
CCCCTAAAAC ACGCAGCTAA CCTATTAGCC ACTAACAGTG ATTGGCCAAC GCTTTATAAC
CTAGACACCT TAGCCAACAA CCAAGTCCCG GTAGCCGCTG CTATCTACAG CGAAGATATG
TTTGTCGAAA TGAGCTACAG CCTAGAAACC GCCAAGCAGG TCGGGAACCT CAAATACTGG
TTAACTTCAG AGTATGAACA CAACGGTATC CGCATGGATG GCGAGCATAT TCTCGATAAG
CTAATAGCGC TTAATCGGGG TGAACAGTTG CGTTAA
|
|---|
| Protein sequence | MKPELSLAGL SARKHTFTLP LNYDDPQGKK IQVFARELLS NDIDTDSNER PFLVFFQGGP
GFSAVRPADN SGWIKRALTE FRVLLLDQRG TGLSTPVSYL SLAHFNSELQ AEYLSHFRAD
NIIRDAEAIR EQLCPGQKWS ILGQSFGGFC VLKYLNDAPE GVKEAYITGG IPSLTRSADE
VYQATYQRVL AKNRDFFTRF SDAQELVTQI AEHLTHHEVR IATGERLTVE MLQLLGINIG
MEQGPESVYY LLEHALIETD LGTHVNPLFL AHFCHLLDFN TNPIFALLHE SIYCQRSASN
WSAQRVRAQY DEFNYEFGKP FLFTGEMVYP WFFEQFTNLK PLKHAANLLA TNSDWPTLYN
LDTLANNQVP VAAAIYSEDM FVEMSYSLET AKQVGNLKYW LTSEYEHNGI RMDGEHILDK
LIALNRGEQL R
|
|---|
| |