| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2952 |
|---|
| Symbol | |
|---|
| ID | 6117267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3616548 |
|---|
| End bp | 3617573 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641634496 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001761320 |
|---|
| Protein GI | 170727294 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCATC ATATAGAGGA TATTCTCTCC CACTGGCAGA CGGCTCCACA TGATGAATGG
GTGCTGGCGG TGATCACTAA AGTCACAGGT TCAGCATACC GTAAAGCAGG AGCCATGATG
TTGTTCCACC CCCTTGGACG CTCTATTGGA CTACTCAGTG GTGGCTGTTT AGAAGCGGAT
CTTCGTCGTC ATGCTCAGAT GTCACTAGAG AAGCAGGAGG CTGTGTTGGT GCAGTATGAT
GCCAGCGATG AATCCGATGC CAGCTATCAA TTAGGGTGCG GCGGTATCGT CGATATCATG
CTTGTCCCCC TAAAACGAGA AAACCATTAC CTGAATTTCC ACCAGTTGTC TGAGCGTCTT
TATCATGGCG GTCAGTTTTT CTACCAAATT ACTTTACCCC ATAGAGACAC CGCTCTTGCC
AATGTGACGG CAAGCATTAA CGCCTATGAT GAGGTGAACT TTCCGGTGGA TGATTTTAAA
CGTGCAGGCA TTTTACGGAC TGGACAAGCT GAGCTGATTA TACCTTTGCG CTCCCGCTAT
CGGCTGGCGA TTTTCGGCGG AGGTTTAGAT GCTCAGCCAG TAGTTGCGAT GGCCTTAAGC
TTAGGTTGGC AGGTGGACTT GATTGATGAG CGAACAAGCT ACGCGAGAAA CCATGATTTC
CCCGGTGCGA GAATTTTTAA GCAATCGGCC GACATGCTTC CTGAACATTT TGAGTCCCAT
TTAGATGCCG TCATTATTAT GCAGCACAAC CTTGAACTGG ATGCTAAAGC GCTGTCAATG
GTGCATAAGA TGGATAGTTG TGAGCACTTA AGTTATGTGG CGCTATTGGG GCCTGCTCAT
CGAAGAGAGC GTGTGCTGCA AAAAGCGGGG CTAAGTAAAA GTGATTTTAA TTGTGTCTTC
TCAGCGCCAG CAGGGTTTGC TTTGGGAGGC GAGCTGCCGG AGTCGGTGGC TTTGAGTATC
TTGGCTCAGT GTCATGGTGT TCTTCACGGT GCTAGACAGA TCCCCTTAGA TAAGGTGATG
GTTTGA
|
|---|
| Protein sequence | MSHHIEDILS HWQTAPHDEW VLAVITKVTG SAYRKAGAMM LFHPLGRSIG LLSGGCLEAD
LRRHAQMSLE KQEAVLVQYD ASDESDASYQ LGCGGIVDIM LVPLKRENHY LNFHQLSERL
YHGGQFFYQI TLPHRDTALA NVTASINAYD EVNFPVDDFK RAGILRTGQA ELIIPLRSRY
RLAIFGGGLD AQPVVAMALS LGWQVDLIDE RTSYARNHDF PGARIFKQSA DMLPEHFESH
LDAVIIMQHN LELDAKALSM VHKMDSCEHL SYVALLGPAH RRERVLQKAG LSKSDFNCVF
SAPAGFALGG ELPESVALSI LAQCHGVLHG ARQIPLDKVM V
|
|---|
| |