| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2914 |
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| Symbol | trpD |
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| ID | 6117229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3562759 |
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| End bp | 3563814 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641634458 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001761282 |
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| Protein GI | 170727256 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.433416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.542217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAA CCGAACAGCC TACTGAACTG CAACCAATAT TAGACAAGCT CTACTCAGGT
CAGTCAGCAA CTCGATTGGA AGCCAAACAG CTGTTCAGCA GCATCATCGC AGGTGAGATG
AGTGAGACCG CGATGGCGGG CATGTTGGTC GCCATGAAGA TGCGCGGTGA GAGCATAGAT
GAAATATCTG GCGCCGCCGA CGCCCTTCGC ACCGCAGCGA AAGCCTTTCC TGCGCCTTGC
GAAGCAACCC GAACAAAAGG CGTTGTTGAT ATCGTAGGCA CAGGTGGTGA TGGCCACAAC
ACGATTAATA TCTCTACCAC GGCTGCTTTT GTCGCCGCGG CGTCCGGTGC TAATGTCGCA
AAACATGGTA ATCGCAGTGT CTCAAGCAAA TCTGGCTCTT CGGATCTATT AGCACAGTTT
GGTATCGATC TCACCATGGC ACCAGAAACT GCGCGGGATT GCTTAGATGA ACTCGGGCTC
TGCTTTCTGT TTGCCCCTCA CTATCATGGC GGCGTTCGCC ATGCAGTGCC TGTTCGTCAA
GCATTGAAAA CCCGCACTCT GTTTAACGTA CTCGGACCGC TGATTAACCC ATCACACCCC
GACTTTATCC TTCTTGGTGT CTATAGTCCT GAGCTCGTTA AACCTATTGC TGAAGTATTA
AAAGCCTTGG GGATGAAACG TGCCATGGTA GTCCATGGAA GTGGGCTCGA TGAGGTTGCT
ATACATGGCG ACACCTTAGT CTGTGAGCTC AATAACGCAG AGATAACCCA ATACACCTTA
ACACCTGAGC AGTTAGGACT CCCCCAAAGT AAACTCACAG ATTTAGAGGG TGGAACACCT
GAGGAGAATG CCCAGTACAC CCGCGCAATC TTACAAGGAA AAGGCCAAGC AGCCCACCAG
CACGCCGTTG CGGCGAATGC CGGTTGCGCC CTCTACATCT CAGGGGTTTC CGATAGCGTA
GAATCGGGCA CTCAACTGGC ATTAGAAACT ATCGCCAGCG GCAGAGCTTA TCAACTACTT
CAGCAGCTCG CCAGCGCAAG CAGTGCAACT AACTAA
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| Protein sequence | MSQTEQPTEL QPILDKLYSG QSATRLEAKQ LFSSIIAGEM SETAMAGMLV AMKMRGESID
EISGAADALR TAAKAFPAPC EATRTKGVVD IVGTGGDGHN TINISTTAAF VAAASGANVA
KHGNRSVSSK SGSSDLLAQF GIDLTMAPET ARDCLDELGL CFLFAPHYHG GVRHAVPVRQ
ALKTRTLFNV LGPLINPSHP DFILLGVYSP ELVKPIAEVL KALGMKRAMV VHGSGLDEVA
IHGDTLVCEL NNAEITQYTL TPEQLGLPQS KLTDLEGGTP EENAQYTRAI LQGKGQAAHQ
HAVAANAGCA LYISGVSDSV ESGTQLALET IASGRAYQLL QQLASASSAT N
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