| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2855 |
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| Symbol | |
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| ID | 6117170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3490715 |
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| End bp | 3491962 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641634401 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001761225 |
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| Protein GI | 170727199 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.220747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000676798 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCGAATAT TAGTCGTCGA GGACAGCAGG GTTGTGTCTC GTATTTTACA ACACCTTATC
GCACAGGAAT TGGGCTGCGA CGTCGATTTT GCTGAAGATA TGGCCACAGC CAGATTACTT
CTAACCCAGT ATAAGTACTT TGTGGCTATT ACTGATCTTA ATCTGCCGGA TGCGCAAGAG
GGAGAGATCG TTAAACTTGT TCAGGGTCAT CAGACACCTT GTATAGTATT GACTGGTAGC
TTAGATGGCC AGCAGAGAAA ACGTCTGCTT CAACTGGGCA TCGTTGATTA TATTTTAAAA
GAGAACCGTT TTAGCTATGA GTATGTGGTT AGACTCGTTA CACGACTTAA GCGTAATGAG
AAGGTTAAAG TGTTGGTCGC CGACGACTCG ATGGTGAGTC GAAAGTTTGT TAGAAGTTTA
CTTGAGCAAC AACTTTTTCA GGTGATTGAG GCTGATGACG GCTTATCGGC ACTAGAGATA
TTAAAGTCTC AGCCCGATAT TACCTTGTTA ATCACTGACT ACAATATGCC GGGTTTAGAT
GGTTTTGGTT TGATTCTAAA GGTCAGAGAG AGCTTTACCC GTGAAGAGCT GGCGATTATA
GGTCTCTCAA GTGATGATGA TGAGAGTCTT TCGGCTCGCT TTATTAAAAA TGGTGCTAAC
GATTTCCTAC AGAAGCCTTT TGTTCATGAG GAGTTTCATT GTCGGGTGCT TAACACCCTA
GACTCTTTAG ATATGATCAG AAAACTCTGG GAGCAGGCAA ATCTAGATTA TCTTACCGGT
GTTTATAATC GTCGTTATTT CTTTAATCTG TTTGAAGAGC AGCTGCAACA GATTGAGCAG
AAAAAAACCA GCTTAACCCT TGCTTTGCTT GATATCGACT TTTTCAAAAA AGTGAACGAT
ACCTATGGTC ATGATATTGG TGATGAAGTG CTGGTTGAGT TTGCTGCTAG ATTGAAGCAC
TTCTTTGGTC AACACTTTAC TGTTGCACGT TTTGGTGGTG AAGAGTTCAC CGTTGCATTT
AGAGGTTTGA ATGAGGATAA GGTCTTCTCT TTAATGGATA AGTTTCGTGC TCAACTTGAG
GTTGAGGCAA TCCAAACCTC CCAGGGGCCG ATCAATGTGA CTGTCAGTAC TGGTATTGCA
GGGCTTAGTG ACGAGAGCTT AGATAACTTA TTACAACGTG CTGACAAGGC GCTTTATGAT
GCAAAAGAGT TGGGCAGAAA CTTAGTCTGT ATTGAAGGGA ATGAGTAA
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| Protein sequence | MRILVVEDSR VVSRILQHLI AQELGCDVDF AEDMATARLL LTQYKYFVAI TDLNLPDAQE
GEIVKLVQGH QTPCIVLTGS LDGQQRKRLL QLGIVDYILK ENRFSYEYVV RLVTRLKRNE
KVKVLVADDS MVSRKFVRSL LEQQLFQVIE ADDGLSALEI LKSQPDITLL ITDYNMPGLD
GFGLILKVRE SFTREELAII GLSSDDDESL SARFIKNGAN DFLQKPFVHE EFHCRVLNTL
DSLDMIRKLW EQANLDYLTG VYNRRYFFNL FEEQLQQIEQ KKTSLTLALL DIDFFKKVND
TYGHDIGDEV LVEFAARLKH FFGQHFTVAR FGGEEFTVAF RGLNEDKVFS LMDKFRAQLE
VEAIQTSQGP INVTVSTGIA GLSDESLDNL LQRADKALYD AKELGRNLVC IEGNE
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