Gene Swoo_2851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2851 
Symbol 
ID6117166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand+ 
Start bp3486129 
End bp3486761 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content42% 
IMG OID641634397 
Producthypothetical protein 
Protein accessionYP_001761221 
Protein GI170727195 
COG category[S] Function unknown 
COG ID[COG4832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.00000359813 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGATA AATATGAGTG GCGAAAAAAG GAAAAGAGTC TCTATATTCC CAAAAATAAG 
CCGGAGTTGC TTGAAGTTCC CTCGTTAAAC TTCATCACTC TATCAGGCGA AGGTAGCCCT 
GAGGATGAGA TATTTACACA GTATATCGGC ACTCTTTACT CTTTGGCTTA TACGATAAAG 
ATGCATCCTA AAACGATGAC GACAAAACCA AATGGCTATT TCGATTTCAC TGTCTACCCG 
TTAGAGGGTA TTTGGGATAT CAATGACCAA GCTAAAGCAC ACTTCTTAGG CACAATAGAT 
AAAAAAGATT TGGTCTATCA GCTAATGATC CGCCAGCCTA AATTTGTCGA CACGAACCTC 
TATGAAGAGA TGCTCAACCT TGCCAAGAGT AAGCGAGATA ACCCGCTATT AGAGCAGGTA 
AAGTTTACAA CAATTACAGA TGGGAGATGT ATTCAAATGC TGCACTTGGG CCCATTTGAG 
AATGAGTCTC AGACCTTCGA GGAGATGGAA TCCTTCGCAC AAGCTCAAGG CCTGACACGT 
CGCTCTAAGG TGCACCGAGA GATATACCTT AGCGATCCTC GTAAAGTCGC CCCAGAAAAG 
CTGAAAACAG TATTAAGGTT TCAAGTGGTT TAA
 
Protein sequence
MSDKYEWRKK EKSLYIPKNK PELLEVPSLN FITLSGEGSP EDEIFTQYIG TLYSLAYTIK 
MHPKTMTTKP NGYFDFTVYP LEGIWDINDQ AKAHFLGTID KKDLVYQLMI RQPKFVDTNL 
YEEMLNLAKS KRDNPLLEQV KFTTITDGRC IQMLHLGPFE NESQTFEEME SFAQAQGLTR 
RSKVHREIYL SDPRKVAPEK LKTVLRFQVV