| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2834 |
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| Symbol | |
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| ID | 6117149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3463865 |
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| End bp | 3464545 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634380 |
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| Product | exonuclease RNase T and DNA polymerase III |
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| Protein accession | YP_001761204 |
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| Protein GI | 170727178 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00375381 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCTGTCTC GCTACCTTTT AAAAAGTAAA CTCTGTTGGC GCGCCTTTCG GGCTGAGGAT
CAAGCTCTTA AGACCTATTA CCACGGACAG CAATCCCTAC TGGAACTCGA CGTTGAGCGT
GCCCCCTTGT TGGCTATCGA CCTTGAGATG ACAGGGCTCG ATGCCCAGTT TGATCAGATC
TTAAGTATTG GTATCGTTCC GATCGAAAAG GGCAGACTTA TACTGTCAAA AGCTGAGCAT
AAATTGGTGA AAATAGAGGG TAGTGTCGGT CAGAGTGCCA CAATCCACGG TATTTTAGAT
CACCACCTTA ATAGCGCGGT ATCTCCAGAG GAGGCGATGA CCTGGTTTTT AGAACGATGC
CAAGGACAGA TGCTGGTGGC TCATCACTCT CCCTTAGATT TGGCGTTTTT ACAAAAAGGG
CTATCAACAC ATTTTCGCCA GAGAGTGACC TTGATGGCTA TCGACACCTT AGCGATAGAG
AAGCGTAGAT TAATGCGTCA GCATGAAGTG CTCAAGGAGG GGGCTTTGCG ACTTGGAGCA
AGTAGAGCGC GATACGGTTT GCCTGTTTAT GCGGCTCATA ATGCCTTGAT TGACGCCATA
GCCTGTGGTG AGCTTTTGCT GGCTCAGATC AGTGCCATAG GCCAAGGCGA AAGTGTAAAA
CTGACAGAGT TACTGGCTTA A
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| Protein sequence | MLSRYLLKSK LCWRAFRAED QALKTYYHGQ QSLLELDVER APLLAIDLEM TGLDAQFDQI
LSIGIVPIEK GRLILSKAEH KLVKIEGSVG QSATIHGILD HHLNSAVSPE EAMTWFLERC
QGQMLVAHHS PLDLAFLQKG LSTHFRQRVT LMAIDTLAIE KRRLMRQHEV LKEGALRLGA
SRARYGLPVY AAHNALIDAI ACGELLLAQI SAIGQGESVK LTELLA
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