| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2781 |
|---|
| Symbol | |
|---|
| ID | 6117089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3396589 |
|---|
| End bp | 3397212 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641634321 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001761152 |
|---|
| Protein GI | 170727126 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.131469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACT ATCTGGTTGT GAATGTGGAT GATATAAGAA CTAATTTTTT TGCAAAGCGT
TTGCCTGTAA TGCCTCTGCC ATTGGCAATA TTACCTGGTG GAATTCAACG GCTAAAGATA
TTCGAACCCA AATACCTCTC TATGATAAAA GTCGCTATTG AAGGTGAGGG CTTTGTAGTC
TGCTTGCATA AAAAGGATTC TCCATACTCC AGCTCTAATT GGGGAGTGTG GGTAAAAATT
ATTGATTTCA ATTTAGGGGA AGGCAGCATT TTGTTAATCG ATATTCAAGC ATTAACTATG
GTCAAACTTA ACACTGTAGA GCGAGATGCT TGTGGGTTAC TCACAGCGGC ATTAACTCCT
ATACAGCATT GGGGTTTTCG TGAAATTAGT GCTGAAACAC GCGAATTAGT TGAGTCTCTT
CGTGAGATTT TTAAGTCTCA TATCAGTTTG CGAGAACTCT ATAAGAAAAC TCATTTTTAT
GACGCTAATT GGGTTTGTGC AAGGTTTATT GAGGTGTTAC CTTTATCATT GAATGAAAAG
GAAAAATTTA TATTTGATTA TAGCTTTGAC CAAATAGAAG GTTTTTTACA TACTTTAATT
CAAGGTACAG TCAAAAACAG TTGA
|
|---|
| Protein sequence | MKDYLVVNVD DIRTNFFAKR LPVMPLPLAI LPGGIQRLKI FEPKYLSMIK VAIEGEGFVV
CLHKKDSPYS SSNWGVWVKI IDFNLGEGSI LLIDIQALTM VKLNTVERDA CGLLTAALTP
IQHWGFREIS AETRELVESL REIFKSHISL RELYKKTHFY DANWVCARFI EVLPLSLNEK
EKFIFDYSFD QIEGFLHTLI QGTVKNS
|
|---|
| |