| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2732 |
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| Symbol | |
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| ID | 6117040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3348438 |
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| End bp | 3349367 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634272 |
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| Product | protein TolA |
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| Protein accession | YP_001761103 |
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| Protein GI | 170727077 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | [TIGR02794] TolA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00666488 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000225144 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGATCGG ATATTACAAT TCCTTTAATT ATTTCAGCTG GCATTCATAT TGGCGTGATA
GTTATTGTCG CCATGGGTGT CGACTTTTCA GAAAAACCTA AGCCTCAGGT TCAAGCCAGT
GCCCCCGCTG TTCAGGCGGT TGTTGTCGAT CAAAGTAAGG TTGCGCAACA TGTTGAGCGT
TTAAAAGCTG AAAAAAAAGA AGCTGAGCGT AAAGAGAAAG CCAGGCAAGA TGAGGCAAAT
AGACAGGTAC GTGAAGCACG AAAAGAGCGT GAGCGCGAGC AAGCTCGAAT TAAGCAACTT
GAGCAAGAGC GTAAACAGAA AGAGGTTGAA ACTAAAAATG CCGCTGACGC TGCGAAGGCT
GCACAGTTAA AACAGAAGCA AGAGAAAGAG AAAGCGGCAA AAGCGGAAGC TGATCGTAAG
CAGAAAGAGA AGGAGCGTAA AGCCTCTGAA GAAGCGGCAA GAAAAGCGGC AGAAAAACGC
AAAGCTGAAG AAGCTGCTGC TAAAAAGGCT GAGGAGGAGC GTAAGCGCAA AGCAGAGGCT
GAGCGTAAAC GTAAGGCTGA AGAGGAAGCT CGCAGGCAGC AAGAGCAGAT GATGCAAGAT
GCGTTGGCAG CTGAACAAGC GTCACTCTCA CAGACCCGAA ATAAACAAGT TACTTCGGAG
GTAAGTCGCT ATACCAGTAT GATCGTAGCT ACGATATCTC GAAATGTTCA ACAAGAAGAG
TCCATGCGTG GAAAGAGCTG CACGGTTTGG GTAAGACTTG CTAAAGATGG GTTTGTTACA
TCTAGCCGAA TTGTGGAGGG AGATCCTGTT TTGTGTCGCG CAACTCAATC TGCAATACAA
AAGGTTCAGC GATTACCCGT ATCTAGTGAA CCTGATGTTT ATGACAAATT GAAAGAATTA
AATATAATCT ACAGGCCTAA ATTTAATTAA
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| Protein sequence | MRSDITIPLI ISAGIHIGVI VIVAMGVDFS EKPKPQVQAS APAVQAVVVD QSKVAQHVER
LKAEKKEAER KEKARQDEAN RQVREARKER EREQARIKQL EQERKQKEVE TKNAADAAKA
AQLKQKQEKE KAAKAEADRK QKEKERKASE EAARKAAEKR KAEEAAAKKA EEERKRKAEA
ERKRKAEEEA RRQQEQMMQD ALAAEQASLS QTRNKQVTSE VSRYTSMIVA TISRNVQQEE
SMRGKSCTVW VRLAKDGFVT SSRIVEGDPV LCRATQSAIQ KVQRLPVSSE PDVYDKLKEL
NIIYRPKFN
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